RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TMC8Q8IU68 726 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF561Q8N587 486 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PAQR8Q8TEZ7 354 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ARNTL2Q8WYA1 636 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 HRASLS5Q96KN8 279 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 TINAGL1Q9GZM7 467 aaPredicted RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 OSGEPL1Q9H4B0 414 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SLC6A5Q9Y345 797 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 MT-ND4P03905 459 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SERPINF1P36955 418 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 TAP2Q03519 686 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 HMGN3Q15651 99 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 TRIM46Q7Z4K8 759 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SNX33Q8WV41 574 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 EBPLQ9BY08 206 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 KLHL9Q9P2J3 617 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 TRPV2Q9Y5S1 764 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SMCO3A2RU48 225 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 HMX2A2RU54 273 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 HSPA12AO43301 675 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ZBTB7AO95365 584 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PRKCGP05129 697 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 UGT2B7P16662 529 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 MICAQ29983 383 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ULK3Q6PHR2 472 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 C5orf46Q6UWT4 87 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF574Q6ZN55 896 aaPredicted RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SIDT2Q8NBJ9 832 aaKnown RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 GPR26Q8NDV2 337 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PROKR2Q8NFJ6 384 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 UCN3Q969E3 161 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 C3orf30Q96M34 536 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 DPP7Q9UHL4 492 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 TMX2Q9Y320 296 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SLC35F4A4IF30 521 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PHYHO14832 338 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ADH1AP07327 375 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 MC4RP32245 332 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 HCCSP53701 268 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 RFTN2Q52LD8 501 aaPredicted RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 NUDT18Q6ZVK8 323 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 VTCN1Q7Z7D3 282 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 C11orf96Q7Z7L8 435 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 PKP4Q99569 1192 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 TXNL4BQ9NX01 149 aaKnown RBP12.35□□□□□ -0.43
VAMP4-201ENST00000236192 CPNE7Q9UBL6 633 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 MIOXQ9UGB7 285 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 MUTYHQ9UIF7 546 aa12.35□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF705GA8MUZ8 300 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CBX7O95931 251 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PCMT1P22061 227 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 LPOP22079 712 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 DLSTP36957 453 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CHRNA4P43681 627 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 RAB8AP61006 207 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 SNRPEP62304 92 aaKnown RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 C14orf28Q4W4Y0 310 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM88Q6PEY1 159 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CILP2Q8IUL8 1156 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 POGLUT1Q8NBL1 392 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM163Q8TC26 289 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ELP5Q8TE02 316 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TM9SF4Q92544 642 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 SEMA3CQ99985 751 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF629Q9UEG4 869 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CDC123O75794 336 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ANXA2P07355 339 aaKnown RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 HOXD8P13378 290 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 RGS19P49795 217 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ATCAYQ86WG3 371 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ARMC10Q8N2F6 343 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ZMIZ2Q8NF64 920 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 MFSD8Q8NHS3 518 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TMEM41AQ96HV5 264 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TBX5Q99593 518 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ALOXE3Q9BYJ1 711 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 BHLHE41Q9C0J9 482 aaPredicted RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CST11Q9H112 138 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 FAM120CQ9NX05 1096 aaKnown RBP12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PCDHB11Q9Y5F2 797 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PCDHB1Q9Y5F3 818 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PCDHGA6Q9Y5G7 932 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 HAS3O00219 553 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 ENPP3O14638 875 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 PRKXP51817 358 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 CAPSQ13938 189 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 GPR176Q14439 515 aa12.34□□□□□ -0.43
VAMP4-201ENST00000236192 TAF1AQ15573 450 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms