RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 MGLLQ99685 303 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 METTL7AQ9H8H3 244 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 KCNK12Q9HB15 430 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 DNAJC15Q9Y5T4 150 aa12.84□□□□□ -0.35
NEK4-201ENST00000233027 MYH6P13533 1939 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 C1GALT1C1LP0DN25 315 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 GGT1P19440 569 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 KDELR2P33947 212 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 HLCSP50747 726 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 OR2T33Q8NG76 320 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 NDNFQ8TB73 568 aa12.83□□□□□ -0.35
NEK4-201ENST00000233027 CUEDC1Q9NWM3 386 aaPredicted RBP12.83□□□□□ -0.35
NEK4-201ENST00000233027 SIGLEC1Q9BZZ2 1709 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 SNAI1O95863 264 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 GPR4P46093 362 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 AFF1P51825 1210 aaKnown RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 CRISP1P54107 249 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 EFR3AQ14156 821 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 GAS6Q14393 721 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 LRRN1Q6UXK5 716 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 TMEM135Q86UB9 458 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 NRROSQ86YC3 692 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 FRS2Q8WU20 508 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 SLC6A7Q99884 636 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 TMEM246Q9BRR3 403 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 PCDHGB5Q9Y5G0 923 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 PCDHGA7Q9Y5G6 932 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 MUSKO15146 869 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 F2P00734 622 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 PVALBP20472 110 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 NR4A2P43354 598 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 CCBE1Q6UXH8 406 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 TIGD4Q8IY51 512 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 OR4K14Q8NGD5 310 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 RIT1Q92963 219 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 RANBP9Q96S59 729 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 TMEM5Q9Y2B1 443 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 PCDH17O14917 1159 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 CA12O43570 354 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 TRAPPC6AO75865 159 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 MYF6P23409 242 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 VSX2P58304 361 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 CLRN1P58418 232 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 PLGLB1Q02325 96 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 TMEM69Q5SWH9 247 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 CES4AQ5XG92 561 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 CNKSR3Q6P9H4 555 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 MAELQ96JY0 434 aaKnown RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 HDHD5Q9BXW7 423 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 OR8D2Q9GZM6 311 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 STUB1Q9UNE7 303 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 HTR3EA5X5Y0 456 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 EPOP01588 193 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 IVDP26440 423 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 NR0B1P51843 470 aaKnown RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 IER5LQ5T953 404 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 GPAT4Q86UL3 456 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 CCDC28AQ8IWP9 274 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 GALNT6Q8NCL4 622 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 OR10T2Q8NGX3 314 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEK4-201ENST00000233027 F2RL3Q96RI0 385 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 DPCDQ9BVM2 203 aaPredicted RBP12.83□□□□□ -0.36
NEK4-201ENST00000233027 ACTL8Q9H568 366 aa12.83□□□□□ -0.36
NEK4-201ENST00000233027 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
NEK4-201ENST00000233027 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 C2orf78A6NCI8 922 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 NFKBIEO00221 500 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 NME4O00746 187 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 SYN1P17600 705 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 NKAPLQ5M9Q1 402 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 NETO1Q8TDF5 533 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 NR4A3Q92570 626 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 TXLNGYQ9BZA5 131 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 IGSF5Q9NSI5 407 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 ACTL7AQ9Y615 435 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 RICTORQ6R327 1708 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 SCAMP2O15127 329 aaKnown RBP12.82□□□□□ -0.36
NEK4-201ENST00000233027 RGS9O75916 674 aaPredicted RBP12.82□□□□□ -0.36
NEK4-201ENST00000233027 FAM189BP81408 668 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 HAGHLQ6PII5 290 aaPredicted RBP12.82□□□□□ -0.36
NEK4-201ENST00000233027 SLC44A3Q8N4M1 653 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 MAPK15Q8TD08 544 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 NRG4Q8WWG1 115 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 INPP5KQ9BT40 448 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 TMEM185BQ9H7F4 350 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 G3V2L1 256 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 CFIP05156 583 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 ETFAP13804 333 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 BMXP51813 675 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 MS4A2Q01362 244 aa12.82□□□□□ -0.36
NEK4-201ENST00000233027 HMBOX1Q6NT76 420 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms