RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 DPTQ07507 201 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 TIMM50Q3ZCQ8 353 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 PERM1Q5SV97 790 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 PIP5KL1Q5T9C9 394 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 CFAP206Q8IYR0 622 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 WRAP53Q9BUR4 548 aaKnown RBP23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 ALOXE3Q9BYJ1 711 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 RACGAP1Q9H0H5 632 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 PCDHGA3Q9Y5H0 932 aa23.71■■□□□ 1.39
RUNDC3A-201ENST00000225441 NUP214P35658 2090 aaPredicted RBP23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 CNOT3O75175 753 aaKnown RBP23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 LIMK1P53667 647 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 PRKCDQ05655 676 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 TMEM52BQ4KMG9 183 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF852Q6ZMS4 543 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 CCDC103Q8IW40 242 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 SLC44A2Q8IWA5 706 aaPredicted RBP23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 RPLP0P6Q8NHW5 317 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 RPL3LQ92901 407 aaKnown RBP23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF764Q96H86 408 aaPredicted RBP23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 NLNQ9BYT8 704 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 TRIM39Q9HCM9 518 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 KCND3Q9UK17 655 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 NDRG2Q9UN36 371 aaKnown RBP23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF451Q9Y4E5 1061 aa23.7■■□□□ 1.39
RUNDC3A-201ENST00000225441 AGAP5A6NIR3 686 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 UPK1BO75841 260 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 PIPP12273 146 aaPredicted RBP23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 TAS2R50P59544 299 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 KRR1Q13601 381 aaKnown RBP23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 REEP3Q6NUK4 255 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 TRIM74Q86UV6 250 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 TRIM73Q86UV7 250 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 RNF130Q86XS8 419 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 FOXJ1Q92949 421 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 PDXPQ96GD0 296 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 MKRN2Q9H000 416 aaKnown RBP23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 SPATA7Q9P0W8 599 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 PCM1Q15154 2024 aa23.7■■□□□ 1.38
RUNDC3A-201ENST00000225441 VEGFDO43915 354 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 KLHL18O94889 574 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 GADD45GO95257 159 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 IFNW1P05000 195 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 C21orf33P30042 268 aaPredicted RBP23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 DSTNP60981 165 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 RPA4Q13156 261 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 SLC5A12Q1EHB4 618 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 MPEG1Q2M385 716 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 WDR48Q8TAF3 677 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 PROX1Q92786 737 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 PITHD1Q9GZP4 211 aaPredicted RBP23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 A4GALTQ9NPC4 353 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 CA14Q9ULX7 337 aa23.69■■□□□ 1.38
RUNDC3A-201ENST00000225441 TMEM221A6NGB7 291 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 ZAR1LA6NP61 321 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 PDE9AO76083 593 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 OXSR1O95747 527 aaPredicted RBP23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 TGFB1P01137 390 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 GADD45AP24522 165 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 ACADLP28330 430 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 PBLDP30039 288 aaPredicted RBP23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 HSD17B2P37059 387 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 SYT16Q17RD7 645 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 EOGTQ5NDL2 527 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 AGBL4Q5VU57 503 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 PNCKQ6P2M8 343 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 HDDC3Q8N4P3 179 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 OR2L2Q8NH16 312 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 OR5P2Q8WZ92 322 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 NIPSNAP1Q9BPW8 284 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 RHBGQ9H310 441 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 OR51B5Q9H339 312 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 ARMC7Q9H6L4 198 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 RLIMQ9NVW2 624 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 CLN6Q9NWW5 311 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 PEX16Q9Y5Y5 336 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 PRAMEF25A6NGN4 478 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 SH3BGRLO75368 114 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 SOD1P00441 154 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 OPN1SWP03999 348 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 ADORA3P0DMS8 318 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 CXCR2P25025 360 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 IDH2P48735 452 aaKnown RBP23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 ST3GAL4Q11206 333 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 ARHGAP19Q14CB8 494 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 C19orf48Q6RUI8 117 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 TMIGD1Q6UXZ0 262 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 CIDECQ96AQ7 238 aaPredicted RBP23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 RAD51AP1Q96B01 352 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 NEURL3Q96EH8 262 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 QRFPRQ96P65 431 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 PELI2Q9HAT8 420 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 SERGEFQ9UGK8 458 aa23.68■■□□□ 1.38
RUNDC3A-201ENST00000225441 MN1Q10571 1320 aaPredicted RBP23.67■■□□□ 1.38
RUNDC3A-201ENST00000225441 A0A1W2PP55 124 aa23.67■■□□□ 1.38
RUNDC3A-201ENST00000225441 TRBC2A0A5B9 178 aa23.67■■□□□ 1.38
RUNDC3A-201ENST00000225441 SNX4O95219 450 aa23.67■■□□□ 1.38
RUNDC3A-201ENST00000225441 ADAP00813 363 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms