RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RBP7Q96R05 134 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 MARK1Q9P0L2 795 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 A6NLC8 198 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
SIX4-201ENST00000216513 CTSCP53634 463 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 WDR4P57081 412 aaKnown RBP13.14□□□□□ -0.31
SIX4-201ENST00000216513 DCDP81605 110 aaKnown RBP13.14□□□□□ -0.31
SIX4-201ENST00000216513 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 KATNBL1Q9H079 304 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 HMG20AQ9NP66 347 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 COMMD3-BMI1R4GMX3 469 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 CCDC182A6NF36 153 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 MSX1P28360 303 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
SIX4-201ENST00000216513 RPE65Q16518 533 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 GTF2IRD2BQ6EKJ0 949 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 GTF2IRD2Q86UP8 949 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 BANPQ8N9N5 519 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 FCRL3Q96P31 734 aaPredicted RBP13.14□□□□□ -0.31
SIX4-201ENST00000216513 CHIAQ9BZP6 476 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 AKTIPQ9H8T0 292 aa13.14□□□□□ -0.31
SIX4-201ENST00000216513 CLK4Q9HAZ1 481 aaKnown RBP13.14□□□□□ -0.31
SIX4-201ENST00000216513 PTPRZ1P23471 2315 aaPredicted RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 MYH11P35749 1972 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 ADPRHP54922 357 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 MYBPC3Q14896 1274 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 AAGABQ6PD74 315 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 NSUN5Q96P11 429 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 TMED5Q9Y3A6 229 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 OR12D1P0DN82 309 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 GLULP15104 373 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 TMEM201Q5SNT2 666 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 VASH1Q7L8A9 365 aaPredicted RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 SLC30A8Q8IWU4 369 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 GIPC3Q8TF64 312 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 WDR60Q8WVS4 1066 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 POU3F2P20265 443 aaPredicted RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 CPOXP36551 454 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 OR1E2P47887 323 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 METTL21CQ5VZV1 264 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 FIP1L1Q6UN15 594 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 CHID1Q9BWS9 393 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 ZDHHC5Q9C0B5 715 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 EEF1E1-BLOC1S5C9J1V9 151 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 EEF1E1O43324 174 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 RPP14O95059 124 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 MAT1AQ00266 395 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 ENPP6Q6UWR7 440 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 CEP97Q8IW35 865 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 FATE1Q969F0 183 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 GPR22Q99680 433 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 ORAI3Q9BRQ5 295 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 REEP4Q9H6H4 257 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 FARSBQ9NSD9 589 aaKnown RBP13.13□□□□□ -0.31
SIX4-201ENST00000216513 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 SYVN1Q86TM6 617 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 OR2L2Q8NH16 312 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 KCNE4Q8WWG9 221 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 STRA6Q9BX79 667 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
SIX4-201ENST00000216513 hCG_1807616A0A1W2PRN6 198 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 DLX3O60479 287 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 SRSF5Q13243 272 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 C5orf22Q49AR2 442 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 ETFBKMTQ8IXQ9 262 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 TIMM29Q9BSF4 260 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 HDAC8Q9BY41 377 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 TMEM165Q9HC07 324 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 POT1Q9NUX5 634 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 GLS2Q9UI32 602 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 CITO14578 2027 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 H3BUI4 141 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 AURKAO14965 403 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 AREL1O15033 823 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 PRODHO43272 600 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 AHCYL1O43865 530 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 OPN1LWP04000 364 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 MYF5P13349 255 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 PGCP20142 388 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 ENTPD1P49961 510 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 PSMD7P51665 324 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 C14orf28Q4W4Y0 310 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 THEM6Q8WUY1 208 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 FGF21Q9NSA1 209 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 OXSMQ9NWU1 459 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 DHCR7Q9UBM7 475 aaKnown RBP13.12□□□□□ -0.31
SIX4-201ENST00000216513 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
SIX4-201ENST00000216513 VDAC3Q9Y277 283 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms