RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PLXNA3P51805 1871 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 C1orf226A1L170 272 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 OTOL1A6NHN0 477 aaPredicted RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 PRRT4C9JH25 899 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 PAK4O96013 591 aaPredicted RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 C1GALT1C1LP0DN25 315 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 NOGQ13253 232 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 CAMK1Q14012 370 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 GPAT3Q53EU6 434 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 TTC23LQ6PF05 361 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 IQCHQ86VS3 1027 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 FAM129CQ86XR2 697 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 OR4N5Q8IXE1 308 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 OR4D11Q8NGI4 311 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 SLC9A6Q92581 669 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 ZG16BQ96DA0 208 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 CCNB1IP1Q9NPC3 277 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 DMRT3Q9NQL9 472 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 CLN6Q9NWW5 311 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 TAAR2Q9P1P5 351 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 HCN4Q9Y3Q4 1203 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 PCDHGA2Q9Y5H1 932 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 SPIN1Q9Y657 262 aaPredicted RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 FAM47E-STBD1D6RA91 191 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 TLR4O00206 839 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 FFAR1O14842 300 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 GUCY1B2O75343 617 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 ALOX5P09917 674 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 ASMTP46597 345 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 DGKGP49619 791 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 SMARCD3Q6STE5 483 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 USP30Q70CQ3 517 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 FAM9CQ8IZT9 166 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 CHTF18Q8WVB6 975 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 GFM1Q96RP9 751 aaKnown RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 RSPO3Q9BXY4 272 aaPredicted RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 EGLN3Q9H6Z9 239 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 PCDHGB6Q9Y5F9 930 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 SCN4AP35499 1836 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 METTL15A6NJ78 407 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 NARSO43776 548 aaKnown RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 KRT8P05787 483 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 FURINP09958 794 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 AVPR1BP47901 424 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 MRPL19P49406 292 aaKnown RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 MVDP53602 400 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 IL18R1Q13478 541 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 IRF3Q14653 427 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 FRMPD2BQ6IN97 320 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 SIX5Q8N196 739 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 TFGQ92734 400 aaPredicted RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 ECHDC3Q96DC8 303 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 C16orf58Q96GQ5 468 aa14.35□□□□□ -0.11
EFNB1-201ENST00000204961 ZCCHC3Q9NUD5 404 aaKnown RBP14.35□□□□□ -0.11
EFNB1-201ENST00000204961 CLDN24A6NM45 220 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 C6P13671 934 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 JUNDP17535 347 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 CRISP1P54107 249 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 GPR19Q15760 415 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 PRAMEF14Q5SWL7 426 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 DCST1Q5T197 706 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 PRAMEF13Q5VWM6 474 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 KIAA1161Q6NSJ0 714 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 FAHD1Q6P587 224 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 SLC46A3Q7Z3Q1 461 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 C6orf120Q7Z4R8 191 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 TMC8Q8IU68 726 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 TMEFF1Q8IYR6 380 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 ZFPM2Q8WW38 1151 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 MCCC1Q96RQ3 725 aaPredicted RBP14.34□□□□□ -0.11
EFNB1-201ENST00000204961 NEK6Q9HC98 313 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 SLCO2B1O94956 709 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 APOA1P02647 267 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 EPHX1P07099 455 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 MYOGP15173 224 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 HOXB9P17482 250 aaPredicted RBP14.34□□□□□ -0.11
EFNB1-201ENST00000204961 TNFSF8P32971 234 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 CD79BP40259 229 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 OPRD1P41143 372 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 XKP51811 444 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 CD83Q01151 205 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 SNAPC1Q16533 368 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 TMEM31Q5JXX7 168 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 HENMT1Q5T8I9 393 aaKnown RBP14.34□□□□□ -0.11
EFNB1-201ENST00000204961 FAM131AQ6UXB0 335 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 TECPR1Q7Z6L1 1165 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 COMTD1Q86VU5 262 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 DYRK4Q9NR20 520 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 C1GALT1Q9NS00 363 aa14.34□□□□□ -0.11
EFNB1-201ENST00000204961 MRPS23Q9Y3D9 190 aaKnown RBP14.34□□□□□ -0.11
EFNB1-201ENST00000204961 CPSF4LA6NMK7 179 aaKnown RBP14.33□□□□□ -0.11
EFNB1-201ENST00000204961 TMCC2O75069 709 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 SOX6P35712 828 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 MAN2A2P49641 1150 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 ATAT1Q5SQI0 421 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 USP43Q70EL4 1123 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 OR9A1PQ8NGU1 263 aa14.33□□□□□ -0.11
EFNB1-201ENST00000204961 ZSCAN5AQ9BUG6 496 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms