RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 C3orf18Q9UK00 162 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 SNX11Q9Y5W9 270 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 TRIM64CA6NLI5 447 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 hCG_2039718K7EN88 272 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 PGRMC2O15173 223 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ZSCAN9O15535 394 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 MAP3K13O43283 966 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TFPTP0C1Z6 253 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ZNF888P0CJ79 500 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FOSL2P15408 326 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ZNF10P21506 573 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 LSSP48449 732 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 CASP9P55211 416 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TUBA4AP68366 448 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 HHEXQ03014 270 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ELOCQ15369 112 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 BHLHB9Q6PI77 547 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TSEN54Q7Z6J9 526 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 OOSP2Q86WS3 158 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 HS3ST5Q8IZT8 346 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FAM46DQ8NEK8 389 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SUN3Q8TAQ9 357 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 MIPOL1Q8TD10 442 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SLC38A5Q8WUX1 472 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 CNRIP1Q96F85 164 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ZNF681Q96N22 645 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FCRL4Q96PJ5 515 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 BBS4Q96RK4 519 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ZNF347Q96SE7 839 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 MBOAT4Q96T53 435 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TOR3AQ9H497 397 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 GIMAP4Q9NUV9 329 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FAM118AQ9NWS6 357 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 KCMF1Q9P0J7 381 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 PHF11Q9UIL8 331 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 A0A0J9YVX5 310 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TLR4O00206 839 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 HMGN4O00479 90 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 NR2F6P10588 404 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FASLGP48023 281 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 NCBP2P52298 156 aaKnown RBP eCLIP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 RAD23AP54725 363 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 C1orf61Q13536 156 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 RNF220Q5VTB9 566 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FOXB2Q5VYV0 432 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 C18orf63Q68DL7 685 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TTC33Q6PID6 262 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SFTPA2Q8IWL1 248 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SIX5Q8N196 739 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 SDR16C5Q8N3Y7 309 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TSPAN14Q8NG11 270 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 GEMIN6Q8WXD5 167 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 C10orf90Q96M02 699 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 MAPKAP1Q9BPZ7 522 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 REEP1Q9H902 201 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 MS4A12Q9NXJ0 267 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TUBA8Q9NY65 449 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 NDUFAF4Q9P032 175 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 FBXW2Q9UKT8 454 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 POMT2Q9UKY4 750 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 MDC1Q14676 2089 aaKnown RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 ARHGEF17Q96PE2 2063 aaPredicted RBP13.53□□□□□ -0.24
RTFDC1-201ENST00000023939 TRIOBPQ9H2D6 2365 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 H0YGG7 62 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 SLC16A6O15403 523 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 P2RX6O15547 441 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 PDE9AO76083 593 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 C9P02748 559 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ITGAMP11215 1152 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ITGA2P17301 1181 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 MPIP34949 423 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ANXA11P50995 505 aaKnown RBP13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 NR1H2P55055 460 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ARF3P61204 181 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 TNFRSF17Q02223 184 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ZP2Q05996 745 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 IL18R1Q13478 541 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 MAPK11Q15759 364 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 SLC36A4Q6YBV0 504 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 CEP68Q76N32 757 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ABHD13Q7L211 337 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 C17orf82Q86X59 251 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 ZNF655Q8N720 491 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 OR56A1Q8NGH5 318 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 C1orf216Q8TAB5 229 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 KLHL6Q8WZ60 621 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 RERGQ96A58 199 aaPredicted RBP13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 SLC35G5Q96KT7 338 aa13.52□□□□□ -0.25
RTFDC1-201ENST00000023939 SEMA6CQ9H3T2 930 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms