RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Socs6Q9JLY0 533 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ankrd12G5E893 2041 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 HttP42859 3119 aa9.37□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm8127E9Q0P0 100 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm21915J3QPM7 133 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm8094K7N6U8 211 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pdlim1O70400 327 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Wnt6P22727 364 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Htr3aP23979 487 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pou2f3P31362 431 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Bmpr1aP36895 532 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Opn1swP51491 346 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Eif1adQ3THJ3 170 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cr1lQ64735 483 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 C1qtnf6Q6IR41 264 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Amer3Q6NS69 780 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Nadsyn1Q711T7 725 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Enkd1Q7TSV9 346 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Elmod2Q8BGF6 293 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Nipal3Q8BGN5 410 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fbxo30Q8BJL1 746 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hcar1Q8C131 343 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Zbtb9Q8CDC7 459 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Clec14aQ8VCP9 459 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cbx7Q8VDS3 158 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Chchd4Q8VEA4 139 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr77Q8VEY9 312 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr382Q8VF79 312 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1033Q8VFK5 310 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr342Q8VGK7 312 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Snx11Q91WL6 271 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dus3lQ91XI1 637 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Spred1Q924S8 444 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm16286Q9CQX6 220 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tmem179bQ9CY24 219 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Atp5oQ9DB20 213 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Sacm1lQ9EP69 587 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Dgat1Q9Z2A7 498 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Cacna1dQ99246 2179 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm7792A0A0J9YU01 481 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tmem215A7E1Z1 235 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Zfp40B1B1D3 796 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm3183D3YUJ6 481 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 8030474K03RikE9Q4Y8 554 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm3139J3QK78 481 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm3106J3QPH3 481 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hsd3b1P24815 373 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Btbd3P58545 530 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 WdcpQ6NV72 663 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Otub1Q7TQI3 271 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Znf569Q80W31 679 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Crb2Q80YA8 1282 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Kcnk10Q8BUW1 535 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Piwil4Q8CGT6 848 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mcfd2Q8K5B2 145 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1278Q8VF39 313 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Elmod3Q91YP6 381 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Bbox1Q924Y0 387 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 TympQ99N42 471 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rps19Q9CZX8 145 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Olfr1508Q9R0K4 310 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Obsl1D3YYU8 1804 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Glipr1l3A0A1W2P7V2 236 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Prr36E9PV26 1098 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gm8180E9PXN0 145 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Vmn2r56E9Q4U5 779 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Prss56F2YMG0 604 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hax1O35387 280 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Bmp4P21275 408 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Adra1aP97718 466 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 H2-Q2Q4KN81 360 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 AardQ811W1 167 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pomt2Q8BGQ4 820 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rgs7bpQ8BQP9 257 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Hus1Q8BQY8 280 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lcmt2Q8BYR1 686 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Chpt1Q8C025 398 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Sidt2Q8CIF6 832 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Spin4Q8K1L2 249 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Pphln1Q8K2H1 381 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Atat1Q8K341 421 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 H2afjQ8R1M2 129 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Nphs2Q91X05 385 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Tmem98Q91X86 226 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Fam32aQ9CR80 112 aaKnown RBP9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Maf1Q9D0U6 258 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 2010005H15RikQ9D8D6 97 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 TsaccQ9DA44 124 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Ndel1Q9ERR1 345 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Srd5a3Q9WUP4 330 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Golga4Q91VW5 2238 aa9.36□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Lcn11A2BHR2 178 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Catsperg1E9Q355 1151 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Zfp995E9Q6M3 437 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mapk12O08911 367 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Rem1O35929 297 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Mpzl2O70255 215 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 F2rl3O88634 396 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 Gpr25P0C5I1 358 aa9.35□□□□□ -0.91
Ccdc40-202ENSMUST00000053440 TP20293 436 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms