RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ttc23lA6H6E9 458 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nkx1-1G3UXB3 402 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zfp607bG3X9H3 648 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm11236J3QMS7 360 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 H2-Q1O19441 368 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Hax1O35387 280 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 DctP29812 517 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Serpina7P61939 418 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tsc22d1P62500 1077 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rps26P62855 115 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 ChatQ03059 641 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 CkbQ04447 381 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Armc5Q5EBP3 926 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cdk6Q64261 326 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 WdcpQ6NV72 663 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 CpmQ80V42 443 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Acp6Q8BP40 418 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tctn1Q8BZ64 593 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr166Q8VGX2 312 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Btnl10Q9JK39 275 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Adam24Q9R160 761 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Atp6ap1Q9R1Q9 463 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr316A0A0N4SVP2 306 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 A0A1W2P799 418 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Ralgps1A2AR50 585 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1306A2BFL7 312 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Xlr5bA2BI50 236 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm14744B1AVU4 173 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm13285B1AYI3 182 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm13275B1AYI8 182 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr592E9PYB3 312 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cd160O88875 185 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Ctla2bP12400 113 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 JundP15066 341 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tead2P48301 445 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 CenpcP49452 906 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rab2bP59279 216 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 H2-M3Q31093 336 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zc3h12aQ5D1E7 596 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr318Q5NCD7 306 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Prkg2Q61410 762 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gdi2Q61598 445 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Q6PAC4 1279 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1322Q7TQW3 310 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1152Q7TR34 310 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rhox11Q810N8 206 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 IfnzQ8BQT1 182 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gprin3Q8BWS5 763 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Sit1Q8C503 180 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cnot2Q8C5L3 540 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 MmaaQ8C7H1 415 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm13278Q8CD73 182 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tbc1d14Q8CGA2 694 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Slc5a11Q8K0E3 673 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn1r214Q8R279 367 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Map3k21Q8VDG6 1002 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Pqbp1Q91VJ5 263 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 AjubaQ91XC0 547 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mrpl9Q99N94 265 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Q9D112 206 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 5430402E10RikQ9D3N5 173 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Spata19Q9DAQ9 154 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Wdr53Q9DB94 358 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rpn2Q9DBG6 631 aaKnown RBP12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tlr4Q9QUK6 835 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nfkb2Q9WTK5 899 aa12.84□□□□□ -0.35
Nup88-201ENSMUST00000035283 Dock3Q8CIQ7 2027 aa12.83□□□□□ -0.35
Nup88-201ENSMUST00000035283 Skint2A7XUX6 400 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 4930455H04RikD3Z622 58 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm9857F7CXR1 130 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Pld3O35405 488 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Socs5O54928 536 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01644 108 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01645 108 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01646 108 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 P01647 108 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Htr3aP23979 487 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Emp1P47801 160 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 DsppP97399 934 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Upf3aQ3ULJ3 422 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ephx3Q3V1F8 367 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Stox2Q499E5 926 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 MuskQ61006 868 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Crb2Q80YA8 1282 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc2a12Q8BFW9 622 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ubash3bQ8BGG7 638 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fbxl22Q8C7B6 236 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Yod1Q8CB27 343 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc22a12Q8CFZ5 553 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Lrch4Q921G6 680 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ppp2r2dQ925E7 453 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 CenpvQ9CXS4 252 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Spatc1lQ9D9W0 342 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tlr1Q9EPQ1 795 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr630Q9EQQ7 319 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Elf4Q9Z2U4 655 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Scgb2b17S4R2V3 82 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm17555F6U8B9 371 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Gm3476K7N6V0 257 aa12.83□□□□□ -0.36
Nup88-201ENSMUST00000035283 Efna3O08545 230 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms