RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Dpysl5Q9EQF6 564 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Habp4Q9JKS5 411 aaKnown RBP17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Dyrk1bQ9Z188 629 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Gm17555F6U8B9 371 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Zfp934K7N6H3 473 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 PtgdsO09114 189 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 ChadO55226 358 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Cmpk2Q3U5Q7 447 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Irf4Q64287 450 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Tas2r140Q7TQA4 312 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Ccdc126Q8BIS8 140 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Slc6a17Q8BJI1 727 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Tctn1Q8BZ64 593 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Tbl3Q8C4J7 801 aaKnown RBP17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 St7lQ8K4P7 559 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Olfr1302Q8VGE9 315 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Olfr1417Q8VGJ6 315 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 AmotQ8VHG2 1126 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Mospd2Q9CWP6 518 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 9230112D13RikQ9D260 137 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Sacm1lQ9EP69 587 aa17.02■□□□□ 0.32
Ptpra-201ENSMUST00000028769 Plin4O88492 1403 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ect2lA0A140LIP2 953 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm44973A0A140LJJ1 189 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 4930455H04RikD3Z622 58 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Zfp809G3X9G7 402 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm29394H3BIW7 199 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm17174M0QWQ9 212 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ephb6O08644 1014 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Hoxd8P23463 289 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Samd12Q0VE29 161 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Tas2r38Q7TQA6 331 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Adipor2Q8BQS5 386 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 AcppQ8CE08 381 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Kctd2Q8CEZ0 266 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Sf3b4Q8QZY9 424 aaKnown RBP17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Oard1Q8R5F3 152 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Cstf3Q99LI7 717 aaKnown RBP17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 TympQ99N42 471 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Znf524Q9D0B1 321 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ap3m1Q9JKC8 418 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 TescQ9JKL5 214 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Slc7a9Q9QXA6 487 aa17.02■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Rhox2bA2A447 191 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Rhox2cA2AWL9 191 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm10639E9Q6L7 222 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Fgf18O89101 207 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Csf2P01587 141 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Rin3P59729 980 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Entpd7Q3TCT4 606 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Defb48Q3UW22 87 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Dalrd3Q6PJN8 538 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Galnt12Q8BGT9 576 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Cxxc5Q91WA4 317 aaKnown RBP17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Atg13Q91YI1 516 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Rpl4Q9D8E6 419 aaKnown RBP17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Psmg2Q9EST4 264 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Scgb2b17S4R2V3 82 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 PtprdQ64487 1912 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm42688A0A0R3P9D1 673 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Spin2-ps6A0A140T8V2 174 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Tnfrsf25B1AWN9 411 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Atp6ap1lD3Z5W0 336 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Vmn1r12G5E8G1 307 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 RngttO55236 597 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Kcnj1O88335 372 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 F2rl3O88634 396 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 ItgamP05555 1153 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ncam1P13595 1115 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Hoxb9P20615 250 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Rad51Q08297 339 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Pde12Q3TIU4 608 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 C1orf109Q499E6 217 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Nr0b2Q62227 260 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 WdcpQ6NV72 663 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Zik1Q80YP6 463 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Atl1Q8BH66 558 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Lmcd1Q8VEE1 365 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Spz1Q99MY0 378 aa17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Q9CWU4 180 aaKnown RBP17.01■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ccl26F8VQM2 93 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Mapk12O08911 367 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Abcb1aP21447 1276 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 AcrP23578 436 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Dennd1bQ3U1T9 766 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm10696Q3UTC4 357 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Klf4Q60793 483 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Wdfy3Q6VNB8 3508 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 TtpaQ8BWP5 278 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ccdc92Q8VDN4 314 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ash2lQ91X20 623 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ppp1r16aQ923M0 524 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Yif1bQ9CX30 311 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Ramp2Q9WUP0 189 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Cpne6Q9Z140 557 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Mcm3apQ9WUU9 1971 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Zcchc7B1AX39 541 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Gm14139F6ZS36 494 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Olfr209L7N1X3 305 aa17■□□□□ 0.31
Ptpra-201ENSMUST00000028769 Hsd3b1P24815 373 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms