RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Fbxl4Q8BH70 621 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfml2aQ8BHP7 681 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Slc41a2Q8BYR8 573 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr96Q8VFE3 313 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Prkar1aQ9DBC7 381 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Abcb10Q9JI39 715 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 RbpmsQ9WVB0 197 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Trgv2A2J008 116 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Adam34A2RSG8 714 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 9330159F19RikD3Z623 648 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Izumo4D3Z690 227 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Vmn2r10K7N621 847 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ddx6P54823 483 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Lad1P57016 528 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ruvbl1P60122 456 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ccdc106Q3ULM0 279 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cpxcr1Q3V0P1 322 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Eri1Q7TMF2 345 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Trmt12Q8BG71 446 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Clrn1Q8K445 232 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Camkk1Q8VBY2 505 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ak6Q8VCP8 172 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr791Q8VGJ0 312 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cox4i2Q91W29 172 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Uckl1Q91YL3 548 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Myo5aQ99104 1853 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Mrps18aQ99N85 196 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cops7aQ9CZ04 275 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 3110001I22RikQ9CZ70 312 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 MtpapQ9D0D3 585 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 IqchQ9D2K4 1071 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr701Q9D3U9 316 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Lrrc69Q9D9Q0 347 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr705Q9EPF7 316 aa10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Znf207Q9JMD0 495 aaKnown RBP10.44□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ralgps1A2AR50 585 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Zfp992B1ASD8 573 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tnfrsf25B1AWN9 411 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 RfngO09009 332 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Alx3O70137 343 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Clcn7O70496 803 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tyrp1P07147 537 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tgfb3P17125 410 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Rab33aP97950 237 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Acsm3Q3UNX5 580 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Trp53i11Q4QQM4 189 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Map3k3Q61084 626 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 BadQ61337 204 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Lag3Q61790 521 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 NanogQ80Z64 305 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Slitrk2Q810C0 846 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tgif2Q8C0Y1 237 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Pcyox1lQ8C7K6 495 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ppwd1Q8CEC6 646 aaKnown RBP10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Zfp991Q8R1N3 573 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 TympQ99N42 471 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 DiabloQ9JIQ3 237 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cdc20Q9JJ66 499 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Fbxo8Q9QZN3 319 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gpr179E9PY61 2293 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Arid1aA2BH40 2283 aaKnown RBP10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 SktA2AQ25 1946 aaKnown RBP10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 BC025446A0A087WQT1 134 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Zfp969A2ART2 485 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr1306A2BFL7 312 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ptrhd1D3Z4S3 140 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gm28048F7BCN0 99 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 AmbnO55189 407 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Dhcr7O88455 471 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Hoxd4P10628 250 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 DcnP28654 354 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Taar8aQ5QD07 344 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cyb5d2Q5SSH8 263 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Olfr1364Q5SZS9 314 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Pum1Q80U78 1189 aaKnown RBP10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Nars2Q8BGV0 477 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Gpr22Q8BZL4 432 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Cep68Q8C0D9 733 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 TmieQ8K467 153 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Kiaa0513Q8R0A7 407 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Vmn1r219Q8R271 312 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tmem159Q922Z1 161 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Art4Q9CRA0 300 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Prps2Q9CS42 318 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Yif1bQ9CX30 311 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tex19.2Q9D5S1 317 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Q9DAD0 168 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Nipa2Q9JJC8 359 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Slc6a14Q9JMA9 638 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 UxtQ9WTZ0 157 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 CtszQ9WUU7 306 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Upk1bQ9Z2C6 260 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Urb1Q571H0 2274 aaKnown RBP10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Tmem215A7E1Z1 235 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Rem1O35929 297 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 JtbO88824 146 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ntf3P20181 258 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Ptpn22P29352 802 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 Samd12Q0VE29 161 aa10.43□□□□□ -0.74
Msh3-201ENSMUST00000022220 CrtamQ149L7 389 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms