RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Gm8180E9PXN0 145 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Bmp7P23359 430 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Rpl3P27659 403 aaKnown RBP17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cdc42P60766 191 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Kcnj8P97794 424 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Dennd1bQ3U1T9 766 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Alg10bQ3UGP8 474 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 MuskQ61006 868 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 ShbQ6PD21 503 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Dlgap3Q6PFD5 977 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Myl12aQ6ZWQ9 172 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Proser3Q7TSA6 634 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Hamp2Q80T19 83 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Slc39a9Q8BFU1 308 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Ccdc126Q8BIS8 140 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 E330021D16RikQ8BW45 371 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Ccdc142Q8CAI1 738 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 EloaQ8CB77 773 aaKnown RBP17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 SuoxQ8R086 546 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Mlc1Q8VHK5 382 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Ndufs2Q91WD5 463 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Clp1Q99LI9 425 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 NwcQ9CQI4 244 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 4930553M12RikQ9CUH1 165 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cby3Q9CVN6 235 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cdrt4Q9DA64 179 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Adam26aQ9R158 697 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Chd3B1AR17 2055 aa17.9■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Trav1A0A075B5Z4 110 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 1700122O11RikJ3QPW6 241 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Pld3O35405 488 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gstm6O35660 218 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tk1P04184 233 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Rc3h2P0C090 1187 aaKnown RBP17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Hmgn1P18608 96 aaKnown RBP17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Htr3aP23979 487 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Pou2f3P31362 431 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Sec24aQ3U2P1 1090 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Glt8d2Q640P4 349 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 AktipQ64362 292 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Elfn2Q68FM6 823 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Kiaa1671Q8BRV5 308 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Cnot2Q8C5L3 540 aaKnown RBP17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tmem221Q8K071 230 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 H2afjQ8R1M2 129 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Oosp1Q925U0 202 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Q9CWU4 180 aaKnown RBP17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 MsraQ9D6Y7 233 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ebna1bp2Q9D903 306 aaKnown RBP17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Spata19Q9DAQ9 154 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 PrelpQ9JK53 378 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tpk1Q9R0M5 243 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm13283A0A087WPG5 182 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Kif28pD3YXS5 1028 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm14139F6ZS36 494 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Zfp37P17141 594 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Hsd3b1P24815 373 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Rad51Q08297 339 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 B4galnt2Q09199 510 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm5460Q3UQ97 254 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tmub2Q3V209 319 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Chsy3Q5DTK1 884 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Wbp4Q61048 376 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Znf516Q7TSH3 1157 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 4933430I17RikQ8BHW4 495 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 ScaiQ8C8N2 606 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Rnf208Q8K0W3 265 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Map3k21Q8VDG6 1002 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Spred1Q924S8 444 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Q9CPZ3 230 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Nusap1Q9ERH4 427 aaKnown RBP17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Slc5a3Q9JKZ2 718 aa17.89■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 H60cB1B213 197 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ap1arE9PYF7 298 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr631F8VPJ9 319 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 OcmP51879 109 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 NrtnP97463 195 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ugt2b36Q3UEP4 530 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Thnsl2Q80W22 483 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Zc3h14Q8BJ05 735 aaKnown RBP17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Vps9d1Q8C190 649 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Slc22a12Q8CFZ5 553 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ffar2Q8VCK6 330 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr811Q8VFI1 319 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Fam3cQ91VU0 227 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 CenpvQ9CXS4 252 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Qrsl1Q9CZN8 525 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Mrpl19Q9D338 292 aaKnown RBP17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Kcnd3Q9Z0V1 655 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 BC034090A0A087WP46 1202 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 A0A286YD17 136 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm13271B1AYH9 182 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr694K7N641 315 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ikzf3O08900 507 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 PrnpP04925 254 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Cyp17a1P27786 507 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Upp1P52624 311 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 PtpaP58389 323 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Lman2lP59481 347 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 LpoQ5SW46 710 aa17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms