RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TAGAPQ8N103 731 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 HORMAD2Q8N7B1 307 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 PXYLP1Q8TE99 480 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 REPS1Q96D71 796 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 WDR34Q96EX3 536 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 MRGPRX3Q96LB0 322 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 TRNT1Q96Q11 434 aaKnown RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 SLC30A2Q9BRI3 323 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 ASPNQ9BXN1 380 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 TP63Q9H3D4 680 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 LSM2Q9Y333 95 aaKnown RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 CCDC88CQ9P219 2028 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 LRG1P02750 347 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 DSTNP60981 165 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 NRARPQ7Z6K4 114 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 CELF5Q8N6W0 485 aaKnown RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 FAM46DQ8NEK8 389 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 VN1R2Q8NFZ6 395 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 RAB8BQ92930 207 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF486Q96H40 463 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-233ENST00000642021 SLC6A18Q96N87 628 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 OR2A14Q96R47 310 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 EFCAB11Q9BUY7 163 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 SGPP1Q9BX95 441 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 ANGPT4Q9Y264 503 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 DYRK1BQ9Y463 629 aa13.17□□□□□ -0.3
PHGDH-233ENST00000642021 PNMA8CA0A1B0GUJ8 204 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 TLR4O00206 839 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 QSOX1O00391 747 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 RTCAO00442 366 aaKnown RBP13.16□□□□□ -0.3
PHGDH-233ENST00000642021 B4GALT2O60909 372 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 CSO75390 466 aaKnown RBP13.16□□□□□ -0.3
PHGDH-233ENST00000642021 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-233ENST00000642021 IFNA14P01570 189 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 TOR1AIP1Q5JTV8 583 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 TCTN3Q6NUS6 607 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 NXPE4Q6UWF7 544 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 OR4D11Q8NGI4 311 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 SLC5A11Q8WWX8 675 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 IRF7Q92985 503 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-233ENST00000642021 NEK6Q9HC98 313 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 FZD3Q9NPG1 666 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 C5AR2Q9P296 337 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 CCL16O15467 120 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 RGS5O15539 181 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 LILRB5O75023 590 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 CCNKO75909 580 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 KRT75O95678 551 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 SCG5P05408 212 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 BCHEP06276 602 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 C8AP07357 584 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 HBQ1P09105 142 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 SYN1P17600 705 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
PHGDH-233ENST00000642021 IRS1P35568 1242 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 CRYBB2P43320 205 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 COPZ1P61923 177 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 DEFB103AP81534 67 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 AGAP6Q5VW22 663 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 REEP3Q6NUK4 255 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 ADGRF3Q8IZF5 1079 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 OR8H2Q8N162 312 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 GPR151Q8TDV0 419 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 PDXPQ96GD0 296 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 CEP19Q96LK0 163 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 AGAP4Q96P64 663 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 ACAT2Q9BWD1 397 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-233ENST00000642021 SNX11Q9Y5W9 270 aa13.16□□□□□ -0.3
PHGDH-233ENST00000642021 A6NL46 340 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 SOD1P00441 154 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 ELFN1P0C7U0 828 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 XPAP23025 273 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-233ENST00000642021 HOXD10P28358 340 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 DEFA1P59665 94 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 DEFA3P59666 94 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 BAK1Q16611 211 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 UAP1L1Q3KQV9 507 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 TIMM50Q3ZCQ8 353 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 OR9A1PQ8NGU1 263 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 ASB15Q8WXK1 588 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 PIK3R3Q92569 461 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 OR2AG1Q9H205 316 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 SMURF1Q9HCE7 757 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 MIEF1Q9NQG6 463 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 PLAGL1Q9UM63 463 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 KIAA1671Q9BY89 1806 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 A0A075B6Q4 140 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 MPZL2O60487 215 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 OSMP13725 252 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 MMP12P39900 470 aa13.15□□□□□ -0.3
PHGDH-233ENST00000642021 HTR3AP46098 478 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms