RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TLCD2A6NGC4 264 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 J3QKU1 62 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 NVLO15381 856 aaKnown RBP12.41□□□□□ -0.42
PHGDH-221ENST00000641573 ZSCAN9O15535 394 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-221ENST00000641573 HCRTR1O43613 425 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 DUX1O43812 170 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 DNAJA2O60884 412 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 CBFA2T3O75081 653 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 GUCY1B2O75343 617 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 SCELO95171 688 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 CER1O95813 267 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 DRD2P14416 443 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 VSX2P58304 361 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-221ENST00000641573 BNIP2Q12982 314 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 SUZ12Q15022 739 aaKnown RBP12.41□□□□□ -0.42
PHGDH-221ENST00000641573 MPEG1Q2M385 716 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 DEFB110Q30KQ9 67 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 AMZ1Q400G9 498 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 LRRC69Q6ZNQ3 347 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF621Q6ZSS3 439 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 ABHD13Q7L211 337 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 IFNEQ86WN2 208 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 NATD1Q8N6N6 113 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-221ENST00000641573 OR4A15Q8NGL6 344 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 CCDC74AQ96AQ1 378 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 KCTD14Q9BQ13 255 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-221ENST00000641573 NLNQ9BYT8 704 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 ALG2Q9H553 416 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 FBXW2Q9UKT8 454 aa12.41□□□□□ -0.42
PHGDH-221ENST00000641573 PTPRBP23467 1997 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 A0A1W2PR48 441 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 H0Y3Z8 333 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 SIGLEC6O43699 453 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 FKBP6O75344 327 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 STAMBPO95630 424 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 C6orf47O95873 294 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ZCCHC18P0CG32 403 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ALOX12P18054 663 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 MLLT3P42568 568 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 SNRPNP63162 240 aaKnown RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 GPLD1P80108 840 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 NDUFAF5Q5TEU4 345 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 TMEM214Q6NUQ4 689 aaKnown RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 DBX2Q6ZNG2 339 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 PLXDC1Q8IUK5 500 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 EID2Q8N6I1 236 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 OR6C4Q8NGE1 309 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 SLC26A7Q8TE54 656 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 RHBDD1Q8TEB9 315 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 UCN3Q969E3 161 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 EXOSC8Q96B26 276 aaKnown RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 AURKBQ96GD4 344 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF764Q96H86 408 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 SERINC2Q96SA4 455 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 MAPKAP1Q9BPZ7 522 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ECSITQ9BQ95 431 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 IKZF5Q9H5V7 419 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 PIF1Q9H611 641 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 DCLRE1BQ9H816 532 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 RNPEPL1Q9HAU8 725 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 STARD5Q9NSY2 213 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 SOHLH2Q9NX45 425 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 NKX1-2Q9UD57 310 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 KLHL3Q9UH77 587 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 VPS4AQ9UN37 437 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 PCDHGB4Q9UN71 923 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 USP22Q9UPT9 525 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ERVK-11Q9UQG0 969 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 MRPS2Q9Y399 296 aaKnown RBP12.4□□□□□ -0.42
PHGDH-221ENST00000641573 ATG4BQ9Y4P1 393 aa12.4□□□□□ -0.42
PHGDH-221ENST00000641573 IGHV5-51A0A0C4DH38 117 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 LY6G6EA0A0G2JKS1 128 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 A0A1W2PRB8 838 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 CPED1A4D0V7 1026 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 EVPLLA8MZ36 301 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 PDPK1O15530 556 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 FLRT2O43155 660 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 B3GALT2O43825 422 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 SRPX2O60687 465 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 AIFM1O95831 613 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 C9P02748 559 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 CTSBP07858 339 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ABCB1P08183 1280 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF883P0CG24 379 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 PNLIPP16233 465 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF10P21506 573 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-221ENST00000641573 HTR1EP28566 365 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 CD1CP29017 333 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 GABRA4P48169 554 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 OR4D2P58180 307 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 CFHR1Q03591 330 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 RCN1Q15293 331 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 DEFB134Q4QY38 66 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 AAGABQ6PD74 315 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 SPRED1Q7Z699 444 aa12.39□□□□□ -0.43
PHGDH-221ENST00000641573 SPATA24Q86W54 205 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms