RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RGS11O94810 467 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 SCG5P05408 212 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 HOXB8P17481 243 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 SLC6A4P31645 630 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 RGS4P49798 205 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 EIF4EBP2Q13542 120 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 SERPINA11Q86U17 422 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 CARNMT1Q8N4J0 409 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 TM9SF4Q92544 642 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 USP7Q93009 1102 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 CRELD1Q96HD1 420 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 DUSP26Q9BV47 211 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 PRR14Q9BWN1 585 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 MED28Q9H204 178 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF624Q9P2J8 865 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 STUB1Q9UNE7 303 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 PDCD11Q14690 1871 aaKnown RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 SYNDIG1LA6NDD5 238 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 PDPK1O15530 556 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 ETHE1O95571 254 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 PRKAR1AP10644 381 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 CPN2P22792 545 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 HTR7P34969 479 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 LIMK1P53667 647 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 AP2S1P53680 142 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 RGNQ15493 299 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 FAM171BQ6P995 826 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 TEX261Q6UWH6 196 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 KCTD20Q7Z5Y7 419 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 TMCO2Q7Z6W1 182 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
SCARB2-227ENST00000640957 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 CD84Q9UIB8 345 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 POFUT2Q9Y2G5 429 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 U3KQ87 197 aa13.13□□□□□ -0.31
SCARB2-227ENST00000640957 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 DRD5P21918 477 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 HOXD9P28356 352 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 MRPL19P49406 292 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 CRISP1P54107 249 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF91Q05481 1191 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 CLEC12AQ5QGZ9 265 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TECPR1Q7Z6L1 1165 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 VRK3Q8IV63 474 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 C1orf52Q8N6N3 182 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SLC28A3Q9HAS3 691 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 PLCXD1Q9NUJ7 323 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TNFRSF10BO14763 440 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 RHOCP08134 193 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 VIPR1P32241 457 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 PTGER3P43115 390 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 PER3P56645 1201 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TAGLNQ01995 201 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TNFAIP8L2Q6P589 184 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF767PQ75MW2 155 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TRIM46Q7Z4K8 759 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TOR1AIP2Q8NFQ8 470 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 RAB8BQ92930 207 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 EPYCQ99645 322 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TAPBPLQ9BX59 468 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 GPR62Q9BZJ7 368 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 REV1Q9UBZ9 1251 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TLR6Q9Y2C9 796 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 KCNE2Q9Y6J6 123 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SHISA3A0PJX4 238 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SERPINI2O75830 405 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 C6orf47O95873 294 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 GPX2P18283 190 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SELENOWP63302 87 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 CSNK2BP67870 215 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ACSM2AQ08AH3 577 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 MAP4K2Q12851 820 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 EXOSC2Q13868 293 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SEC23BQ15437 767 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 CRB2Q5IJ48 1285 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 MORN1Q5T089 497 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ACSM2BQ68CK6 577 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 CXorf57Q6NSI4 855 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF683Q8IZ20 524 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TCTE3Q8IZS6 198 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ZNF655Q8N720 491 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 PEX13Q92968 403 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TESCQ96BS2 214 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 SLC6A18Q96N87 628 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
SCARB2-227ENST00000640957 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 ATP6V1HQ9UI12 483 aa13.12□□□□□ -0.31
SCARB2-227ENST00000640957 AP3M1Q9Y2T2 418 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms