RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	SEMA6B	Q9H3T3	888 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	DYRK4	Q9NR20	520 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	COL20A1	Q9P218	1284 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	B4GALT6	Q9UBX8	382 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072		U3KQ87	197 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ADGRB3	O60242	1522 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ACSM4	P0C7M7	580 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	TMEM253	P0C7T8	217 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	IGFBP4	P22692	258 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	CD6	P30203	668 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	CEACAM3	P40198	252 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	NDUFV1	P49821	464 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	PLK1	P53350	603 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	FKBP3	Q00688	224 aa	Known RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	SOX4	Q06945	474 aa	Predicted RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	PWP1	Q13610	501 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	BAK1	Q16611	211 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	GPR33	Q49SQ1	333 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ZNF628	Q5EBL2	1059 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	CLLU1	Q5K131	121 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	TMEM240	Q5SV17	173 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ANGEL2	Q5VTE6	544 aa	Known RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ATG9B	Q674R7	924 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	VASN	Q6EMK4	673 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ACSM5	Q6NUN0	579 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	NAPRT	Q6XQN6	538 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ZNF720	Q7Z2F6	126 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	RBM45	Q8IUH3	476 aa	Known RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	CAMKV	Q8NCB2	501 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	GCDH	Q92947	438 aa	Predicted RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	DVL3	Q92997	716 aa	Predicted RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	OTULIN	Q96BN8	352 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	MRPL38	Q96DV4	380 aa	Known RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	OTUB1	Q96FW1	271 aa	Predicted RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	IGSF21	Q96ID5	467 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	NEDD4L	Q96PU5	975 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	EBNA1BP2	Q99848	306 aa	Known RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	LGR4	Q9BXB1	951 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	THAP2	Q9H0W7	228 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	RNF208	Q9H0X6	261 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	PRMT7	Q9NVM4	692 aa	Predicted RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	MRPL22	Q9NWU5	206 aa	Known RBP	5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	BARHL2	Q9NY43	387 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	FBXL3	Q9UKT7	428 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	ADAMTS5	Q9UNA0	930 aa		5.9	□□□□□ -1.46
NECAP1-222	ENST00000640072	CNTNAP1	P78357	1384 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	ADAMTS13	Q76LX8	1427 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	ZNF142	P52746	1687 aa	Predicted RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	KIF1B	O60333	1816 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	DRGX	A6NNA5	263 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RNF13	O43567	381 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	STX11	O75558	287 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	CBX7	O95931	251 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	CSF1	P09603	554 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	NID1	P14543	1247 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RPA2	P15927	270 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	PAICS	P22234	425 aa	Known RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	APEX1	P27695	318 aa	Known RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	EPHA8	P29322	1005 aa	Predicted RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	NAA10	P41227	235 aa	Predicted RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RBM34	P42696	430 aa	Known RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	INPP1	P49441	399 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RAB2A	P61019	212 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	NUTF2	P61970	127 aa	Known RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RPS8	P62241	208 aa	Known RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	EPS8	Q12929	822 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	SEMA3B	Q13214	749 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	DUSP28	Q4G0W2	176 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	ANKRD54	Q6NXT1	300 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	VWA1	Q6PCB0	445 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RHBDF2	Q6PJF5	856 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	TFAP2E	Q6VUC0	442 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	NPSR1	Q6W5P4	371 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	TAS1R1	Q7RTX1	841 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RBFA	Q8N0V3	343 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	CMTR1	Q8N1G2	835 aa	Known RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	WDTC1	Q8N5D0	677 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	PARP16	Q8N5Y8	322 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	COMMD1	Q8N668	190 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	TOP6BL	Q8N6T0	577 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	CHDH	Q8NE62	594 aa	Predicted RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	ELP5	Q8TE02	316 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	RCN3	Q96D15	328 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	C14orf144	Q96I85	54 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	NODAL	Q96S42	347 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	CCDC3	Q9BQI4	270 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	USE1	Q9NZ43	259 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	MED11	Q9P086	117 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	KLHL21	Q9UJP4	597 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	TP53TG5	Q9Y2B4	290 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	LTBP3	Q9NS15	1303 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072	SPATA31D1	Q6ZQQ2	1576 aa		5.9	□□□□□ -1.47
NECAP1-222	ENST00000640072		A0A1B0GW55	424 aa		5.89	□□□□□ -1.47
NECAP1-222	ENST00000640072	TCRBV7S2A1N4T	A0A589	114 aa		5.89	□□□□□ -1.47
NECAP1-222	ENST00000640072	CBX4	O00257	560 aa		5.89	□□□□□ -1.47
NECAP1-222	ENST00000640072	KLF11	O14901	512 aa		5.89	□□□□□ -1.47
NECAP1-222	ENST00000640072	SSX4	O60224	188 aa		5.89	□□□□□ -1.47
NECAP1-222	ENST00000640072	FADS1	O60427	444 aa		5.89	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms