RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 THAP11Q96EK4 314 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 HRASLS5Q96KN8 279 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 DPH7Q9BTV6 452 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 KLHL31Q9H511 634 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 DUSP21Q9H596 190 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 SLC6A20Q9NP91 592 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 RLIMQ9NVW2 624 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 TICRRQ7Z2Z1 1910 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 C5orf58C9J3I9 102 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 DNAJB5O75953 348 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 KLF8O95600 359 aaPredicted RBP20.43■□□□□ 0.86
CLN6-224ENST00000638076 EGFP01133 1207 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 CD247P20963 164 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 XCR1P46094 333 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 NPTX1Q15818 432 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 MICAQ29983 383 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 Q6ZPB1 254 aaPredicted RBP20.43■□□□□ 0.86
CLN6-224ENST00000638076 SLC44A2Q8IWA5 706 aaPredicted RBP20.43■□□□□ 0.86
CLN6-224ENST00000638076 ZNF540Q8NDQ6 660 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 RHNO1Q9BSD3 238 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 PCDHGB1Q9Y5G3 927 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 PCDHGA6Q9Y5G7 932 aa20.43■□□□□ 0.86
CLN6-224ENST00000638076 HAT1O14929 419 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 PCDHGA12O60330 932 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 NFATC3Q12968 1075 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 ADAM15Q13444 863 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 DCTN2Q13561 401 aaKnown RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 RAB30Q15771 203 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 PROX2Q3B8N5 592 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 NDUFAF5Q5TEU4 345 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 ENTHD1Q8IYW4 607 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 LGI4Q8N135 537 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 FBXL6Q8N531 539 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 FAR1Q8WVX9 515 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 RAB8BQ92930 207 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 ZNF764Q96H86 408 aaPredicted RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 PIP5K1AQ99755 562 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 FUNDC2Q9BWH2 189 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 PREBQ9HCU5 417 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 A4GALTQ9NPC4 353 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 SPTBN5Q9NRC6 3674 aaKnown RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 POM121BA6NF01 834 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 PRICKLE3O43900 615 aaPredicted RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 ANXA8P13928 327 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 GSSP48637 474 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 GP2P55259 537 aaKnown RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 TRA2BP62995 288 aaKnown RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 HPCAP84074 193 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 GANABQ14697 944 aaKnown RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 TCEA2Q15560 299 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 TMEM145Q8NBT3 493 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 OR2L3Q8NG85 312 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 JPH3Q8WXH2 748 aaPredicted RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 DTNBP1Q96EV8 351 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 TMEM19Q96HH6 336 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 CSF3RQ99062 836 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 ACSS1Q9NUB1 689 aaPredicted RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 SPHK1Q9NYA1 384 aa20.42■□□□□ 0.86
CLN6-224ENST00000638076 FAM32AQ9Y421 112 aaKnown RBP20.42■□□□□ 0.86
CLN6-224ENST00000638076 PRSS38A1L453 326 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 ZNF99A8MXY4 864 aaPredicted RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 AXIN1O15169 862 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 RECKO95980 971 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 ZNF182P17025 639 aaPredicted RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 PEBP1P30086 187 aaKnown RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 CTHP32929 405 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 KRT20P35900 424 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 CCT3P49368 545 aaKnown RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 CLDN2P57739 230 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 TP53BP2Q13625 1128 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 ZIC1Q15915 447 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 TMEM35AQ53FP2 167 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 AP1ARQ63HQ0 302 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 FKBP10Q96AY3 582 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 SCARF2Q96GP6 870 aaPredicted RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 NIPSNAP1Q9BPW8 284 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 ACER3Q9NUN7 267 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 PCDHGA10Q9Y5H3 936 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 ENPP4Q9Y6X5 453 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 WASHC1A8K0Z3 465 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 FOXD2O60548 495 aaPredicted RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 FAM20BO75063 409 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 WBP4O75554 376 aaKnown RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 TFPTP0C1Z6 253 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 FUT4P22083 530 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 HTR1BP28222 390 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 CD6P30203 668 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 HYAL2Q12891 473 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 WASH2PQ6VEQ5 465 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 MTSS1LQ765P7 747 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 APH1BQ8WW43 257 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 SIPA1Q96FS4 1042 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 RIPOR3Q96MK2 946 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 GPN2Q9H9Y4 310 aaPredicted RBP20.41■□□□□ 0.86
CLN6-224ENST00000638076 FBRSQ9HAH7 460 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 TAS2R7Q9NYW3 318 aa20.41■□□□□ 0.86
CLN6-224ENST00000638076 C4orf51C9J302 202 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 HMGN4O00479 90 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 PCDH17O14917 1159 aa20.4■□□□□ 0.86
CLN6-224ENST00000638076 ERI3O43414 337 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms