RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 NEUROD4Q9HD90 331 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 LYARQ9NX58 379 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 OR6C2Q9NZP2 312 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 RHCGQ9UBD6 479 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 AASSQ9UDR5 926 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 SARDHQ9UL12 918 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 PCDHB14Q9Y5E9 798 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 PCDHGB5Q9Y5G0 923 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 HS3ST3A1Q9Y663 406 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 KNTC1P50748 2209 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 CNTRLQ7Z7A1 2325 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 A0A1W2PPC1 479 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 NDUFB5O43674 189 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 IDH3BO43837 385 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 ATE1O95260 518 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 C9P02748 559 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 CCNYL3P0C7X3 344 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 AK4P27144 223 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 MAOBP27338 520 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 SNAPC1Q16533 368 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 VMACQ2NL98 169 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TMEM35AQ53FP2 167 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TMEM196Q5HYL7 178 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TMEM31Q5JXX7 168 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 KIAA1614Q5VZ46 1190 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 FIGLAQ6QHK4 219 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TICAM1Q8IUC6 712 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 MFSD2AQ8NA29 543 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 FBXO15Q8NCQ5 510 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 NFKBIDQ8NI38 313 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 NETO1Q8TDF5 533 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 NUDT8Q8WV74 236 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TEX37Q96LM6 180 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TGM7Q96PF1 710 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 INPP5KQ9BT40 448 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TM9SF3Q9HD45 589 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 ADAP2Q9NPF8 381 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 MRPS7Q9Y2R9 242 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 CLCA3PQ9Y6N3 262 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 A0A096LPI6 279 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 SLC1A7O00341 560 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 FZD6O60353 706 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 SNX4O95219 450 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 STATHP02808 62 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 PDHA2P29803 388 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 PSMD4P55036 377 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 VSX2P58304 361 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 RPS3AP61247 264 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 ZXDBP98169 803 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 SLC36A3Q495N2 470 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 CYBRD1Q53TN4 286 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 KLHL17Q6TDP4 642 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 FAM131AQ6UXB0 335 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 PIWIL3Q7Z3Z3 882 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 CLECL1Q8IZS7 167 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 IL17RCQ8NAC3 791 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 FAM110BQ8TC76 370 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 IPCEF1Q8WWN9 437 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 GAB3Q8WWW8 586 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 JPH3Q8WXH2 748 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 RDH12Q96NR8 316 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 UHRF1Q96T88 793 aaPredicted RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 RPP25Q9BUL9 199 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 SLC6A17Q9H1V8 727 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TUBB1Q9H4B7 451 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 POLE4Q9NR33 117 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 TVP23BQ9NYZ1 205 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 UTS2RQ9UKP6 389 aa7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 WBP11Q9Y2W2 641 aaKnown RBP7.35□□□□□ -1.23
CACNA1D-220ENST00000636999 PRR23D1E9PI22 279 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 PRR23D2P0DMB1 279 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 TIA1P31483 386 aaKnown RBP eCLIP7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 ACSL1P33121 698 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 DCTP40126 519 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 CDK6Q00534 326 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 DPTQ07507 201 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 KIR2DS3Q14952 304 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 ARHGAP40Q5TG30 622 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 HMBOX1Q6NT76 420 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 USP53Q70EK8 1073 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 SLC22A16Q86VW1 577 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 SPEM1Q8N4L4 309 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 SLC15A4Q8N697 577 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 HUS1BQ8NHY5 278 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 TEX47Q8TBZ9 253 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 ART5Q96L15 291 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 MRGPRX1Q96LB2 322 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 SLC38A2Q96QD8 506 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 DUSP23Q9BVJ7 150 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 STRADBQ9C0K7 418 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 PELI2Q9HAT8 420 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 SNTG1Q9NSN8 517 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 PTGFRNQ9P2B2 879 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 COLQQ9Y215 455 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 PCDHGA8Q9Y5G5 932 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 TNFRSF10CO14798 259 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 NME6O75414 186 aaPredicted RBP7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 ARHGEF15O94989 841 aa7.34□□□□□ -1.23
CACNA1D-220ENST00000636999 C6orf47O95873 294 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms