RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MOCOSQ96EN8 888 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 FRG2BQ96QU4 278 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 ALOX15BO15296 676 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 AP1G1O43747 822 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 DOK2O60496 412 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SHC2P98077 582 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 SPIN4Q56A73 249 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 RBM20Q5T481 1227 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 GPRC6AQ5T6X5 926 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 MCATQ8IVS2 390 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 PROKR1Q8TCW9 393 aa17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 RPL36Q9Y3U8 105 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-227ENST00000636549 EI24O14681 340 aa17.14■□□□□ 0.34
CACNA1A-227ENST00000636549 ACOX3O15254 700 aa17.14■□□□□ 0.34
CACNA1A-227ENST00000636549 PGM2Q96G03 612 aa17.14■□□□□ 0.34
CACNA1A-227ENST00000636549 MACROD1Q9BQ69 325 aa17.14■□□□□ 0.34
CACNA1A-227ENST00000636549 NAA11Q9BSU3 229 aaPredicted RBP17.14■□□□□ 0.34
CACNA1A-227ENST00000636549 PAK6Q9NQU5 681 aaPredicted RBP17.14■□□□□ 0.34
CACNA1A-227ENST00000636549 OR6C6A6NF89 314 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 RNF225M0QZC1 329 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 TSPAN6O43657 245 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 GCH1P30793 250 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 CBLBQ13191 982 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 DUOXA1Q1HG43 343 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 STEAP3Q658P3 488 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 MYRFLQ96LU7 910 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 IGFBP1P08833 259 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 AK4P27144 223 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 RBM34P42696 430 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 ZXDBP98169 803 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 HHEXQ03014 270 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 ESCO2Q56NI9 601 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF773Q6PK81 442 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 EID2Q8N6I1 236 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 PISDQ9UG56 409 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 DLGAP4Q9Y2H0 992 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 UBE2J1Q9Y385 318 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 GMEB1Q9Y692 573 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 REREQ9P2R6 1566 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 SCGB2A1O75556 95 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 STT3AP46977 705 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 NTRK2Q16620 822 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 PTCHD3Q3KNS1 767 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 Q6ZVL8 140 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 KRTCAP2Q8N6L1 136 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 TMCO6Q96DC7 493 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 PIGVQ9NUD9 493 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 DTLQ9NZJ0 730 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM230AA0A1W2PPH8 454 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 M0QX08 132 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 RCBTB2O95199 551 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 PTPN6P29350 595 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 EEF1A1P68104 462 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 CRYZQ08257 329 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 RHEBQ15382 184 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 SAMD14Q8IZD0 417 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 ST6GALNAC5Q9BVH7 336 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 HSFX1Q9UBD0 423 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 PCDHGA10Q9Y5H3 936 aa17.14■□□□□ 0.33
CACNA1A-227ENST00000636549 EEF1E1-BLOC1S5C9J1V9 151 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 EEF1E1O43324 174 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 COCHO43405 550 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 IL1RNP18510 177 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 CRHBPP24387 322 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 AWAT2Q6E213 333 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ASPGQ86U10 573 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 CSNK1A1LQ8N752 337 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 HDAC2Q92769 488 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 SDCBP2Q9H190 292 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEM51Q9NW97 253 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 GXYLT2A0PJZ3 443 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 ENTPD6O75354 484 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 CLN5O75503 358 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 TOXO94900 526 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 SCELO95171 688 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 CDK6Q00534 326 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 TRIM46Q7Z4K8 759 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 PDCD1LG2Q9BQ51 273 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 TNFRSF19Q9NS68 423 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 CDC14CA4D256 554 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 KLRC4O43908 158 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 RAB36O95755 333 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 NR2C1P13056 603 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 LUMP51884 338 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 PIGFQ07326 219 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 SWT1Q5T5J6 900 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 THAP4Q8WY91 577 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM71F1Q96KD3 344 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM83CQ9BQN1 747 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 KCNIP1Q9NZI2 227 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 VWDEQ8N2E2 1590 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 SAGE2PA6NJ88 616 aa17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 RTCAO00442 366 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-227ENST00000636549 TIMP2P16035 220 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms