RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 SLC13A2Q13183 592 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 KIRREL2Q6UWL6 708 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 KIF2BQ8N4N8 673 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 CNRIP1Q96F85 164 aaPredicted RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 LRFN5Q96NI6 719 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 PTCHD1Q96NR3 888 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 CRB3Q9BUF7 120 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 TRIM55Q9BYV6 548 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 RGS14O43566 566 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 MAN1A2O60476 641 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 ERAL1O75616 437 aaKnown RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 SEC24DO94855 1032 aaPredicted RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 CT62P0C5K7 136 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 PIM1P11309 404 aaPredicted RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 AGXTP21549 392 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 PHC1P78364 1004 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 MRPS35P82673 323 aaKnown RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 ATP1A4Q13733 1029 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 NSDHLQ15738 373 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 ATP6AP1LQ52LC2 224 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 TMEM35AQ53FP2 167 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 MANEAQ5SRI9 462 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 RGS9BPQ6ZS82 235 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 BPHLQ86WA6 291 aaPredicted RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 ZNF248Q8NDW4 579 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 DNAJB14Q8TBM8 379 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 RAB3IL1Q8TBN0 382 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 PROKR1Q8TCW9 393 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 EXOSC8Q96B26 276 aaKnown RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 MAELQ96JY0 434 aaKnown RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 RPF2Q9H7B2 306 aaKnown RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 ADAM21Q9UKJ8 722 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 IGLV3-12A0A075B6K2 115 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 TXNDC9O14530 226 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 SRSF11Q05519 484 aaKnown RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 PRMT9Q6P2P2 845 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 PAOXQ6QHF9 649 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 PPP1R32Q7Z5V6 425 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 GBP7Q8N8V2 638 aaPredicted RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 MAGEB10Q96LZ2 347 aaPredicted RBP8□□□□□ -1.13
CDKL5-209ENST00000635828 CES1P1Q9UKY3 287 aa8□□□□□ -1.13
CDKL5-209ENST00000635828 K7EM74 188 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SOCS6O14544 535 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CREG1O75629 220 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SCELO95171 688 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CHEK2O96017 543 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 F10P00742 488 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ZFP36L2P47974 494 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 DGKQP52824 942 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CASP9P55211 416 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 WDR53Q7Z5U6 358 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CNPY4Q8N129 248 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 OR2Y1Q8NGV0 311 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SNIP1Q8TAD8 396 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ELAC2Q9BQ52 826 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 WDR77Q9BQA1 342 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 TMEM120AQ9BXJ8 343 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ZBTB20Q9HC78 741 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 URADA6NGE7 173 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SRRM3A6NNA2 597 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 GABRR3A8MPY1 467 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SLC28A1O00337 649 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 TNFRSF17Q02223 184 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 OCA2Q04671 838 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 C2orf80Q0P641 193 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 UBAP2LQ14157 1087 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 FCRLBQ6BAA4 426 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ANKRD46Q86W74 232 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 TICAM1Q8IUC6 712 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ZCCHC7Q8N3Z6 543 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ADAMTS17Q8TE56 1095 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 THAP3Q8WTV1 239 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 MVB12AQ96EY5 273 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CCDC134Q9H6E4 229 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 PNO1Q9NRX1 252 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 TLN1Q9Y490 2541 aaKnown RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 EML6Q6ZMW3 1958 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SERTM1A2A2V5 107 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CDC14CA4D256 554 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 A6NL46 340 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ANKRD28O15084 1053 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 PRMT3O60678 531 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 HEXBP07686 556 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 LAMP1P11279 417 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 EMP3P54852 163 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 RAB38P57729 211 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 PHEXP78562 749 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 UGT8Q16880 541 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 SPIN4Q56A73 249 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 GALNT18Q6P9A2 607 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CCDC116Q8IYX3 515 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ARFGAP2Q8N6H7 521 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 OTUB1Q96FW1 271 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 CCNL2Q96S94 520 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 TRIM8Q9BZR9 551 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 ARMCX1Q9P291 453 aa7.99□□□□□ -1.13
CDKL5-209ENST00000635828 GPN3Q9UHW5 284 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-209ENST00000635828 MYO1DO94832 1006 aa7.98□□□□□ -1.13
CDKL5-209ENST00000635828 SEMA3DO95025 777 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms