RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, human

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-208	ENST00000634934	RUNX2	Q13950	521 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	SMU1	Q2TAY7	513 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	ARHGAP40	Q5TG30	622 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	OGFOD2	Q6N063	350 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	GALNT18	Q6P9A2	607 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	SPATA19	Q7Z5L4	167 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	PGAM4	Q8N0Y7	254 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	LIX1	Q8N485	282 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	PROKR1	Q8TCW9	393 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	MVB12A	Q96EY5	273 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	C11orf24	Q96F05	449 aa	Predicted RBP	13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	CLPTM1L	Q96KA5	538 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	ZNF304	Q9HCX3	659 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	SIRT5	Q9NXA8	310 aa		13.65	□□□□□ -0.22
LINC00339-208	ENST00000634934	TRABD2B	A6NFA1	517 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	C1QTNF9B	B2RNN3	333 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934		H0YIG0	161 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934		H3BNX3	289 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	MEN1	O00255	615 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	CHST10	O43529	356 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	KLK3	P07288	261 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	ALDOC	P09972	364 aa	Known RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	FAM58BP	P0C7Q3	252 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	C1QTNF9	P0C862	333 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	NCF2	P19878	526 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	FBL	P22087	321 aa	Known RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	TACR1	P25103	407 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	HSPA13	P48723	471 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	DCD	P81605	110 aa	Known RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SYT16	Q17RD7	645 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	ALDH16A1	Q8IZ83	802 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	DEFB107A	Q8IZN7	70 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	EFCAB3	Q8N7B9	438 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	GALNT6	Q8NCL4	622 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	CLHC1	Q8NHS4	586 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	FCRL1	Q96LA6	429 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SLC46A1	Q96NT5	459 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	CATSPER2	Q96P56	530 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	TSSK3	Q96PN8	268 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	GBP5	Q96PP8	586 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	LYAR	Q9NX58	379 aa	Known RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SCN3A	Q9NY46	2000 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	AK5	Q9Y6K8	562 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	IGF2R	P11717	2491 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	TEX51	A0A1B0GUA7	166 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SMIM31	A0A1B0GVY4	71 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	G6PD	P11413	515 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	PRPS2	P11908	318 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SDC1	P18827	310 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	AGXT	P21549	392 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	PIK3R1	P27986	724 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SLC5A2	P31639	672 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	RORA	P35398	523 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	LIM2	P55344	173 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	NME5	P56597	212 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	TAS2R50	P59544	299 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	ZNF763	Q0D2J5	394 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	MED21	Q13503	144 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	DSG2	Q14126	1118 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	RPS6KA2	Q15349	733 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	C11orf91	Q3C1V1	193 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	NKAIN1	Q4KMZ8	207 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	PIGG	Q5H8A4	983 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	GPR180	Q86V85	440 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	DSEL	Q8IZU8	1212 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	CA13	Q8N1Q1	262 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	MARVELD2	Q8N4S9	558 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	ADCY4	Q8NFM4	1077 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	C16orf78	Q8WTQ4	265 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	MR1	Q95460	341 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	DUS3L	Q96G46	650 aa	Known RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SH3GL3	Q99963	347 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	MAPKAP1	Q9BPZ7	522 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	NPL	Q9BXD5	320 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	NRSN2	Q9GZP1	204 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	TRPC4	Q9UBN4	977 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	RAB26	Q9ULW5	256 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	DAPP1	Q9UN19	280 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	SPACA6	W5XKT8	324 aa		13.64	□□□□□ -0.23
LINC00339-208	ENST00000634934	PSMD12	O00232	456 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	GUCY1B2	O75343	617 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	PABPC4L	P0CB38	370 aa	Known RBP	13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	ACPP	P15309	386 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	CPN2	P22792	545 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	PTGR1	Q14914	329 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	MAPRE2	Q15555	327 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	MRM1	Q6IN84	353 aa	Known RBP	13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	RNF111	Q6ZNA4	994 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	TICAM1	Q8IUC6	712 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	SHISA5	Q8N114	240 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	OR51Q1	Q8NH59	317 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	GFM2	Q969S9	779 aa	Known RBP	13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	TM4SF18	Q96CE8	201 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	PEX11G	Q96HA9	241 aa		13.63	□□□□□ -0.23
LINC00339-208	ENST00000634934	EGLN2	Q96KS0	407 aa		13.63	□□□□□ -0.23

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