RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 OPN5Q6U736 354 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 GOLM1Q8NBJ4 401 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 KCNC2Q96PR1 638 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 EHD1Q9H4M9 534 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 POPDC3Q9HBV1 291 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 LYRM4Q9HD34 91 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 NSMCE4AQ9NXX6 385 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 TUBA8Q9NY65 449 aaPredicted RBP17.55■□□□□ 0.4
SMN2-215ENST00000628696 CD274Q9NZQ7 290 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 COPS7AQ9UBW8 275 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 MTO1Q9Y2Z2 717 aaKnown RBP17.55■□□□□ 0.4
SMN2-215ENST00000628696 SPACA6W5XKT8 324 aa17.55■□□□□ 0.4
SMN2-215ENST00000628696 AKAP6Q13023 2319 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 A0A0G2JNJ9 132 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 RTCAO00442 366 aaKnown RBP17.54■□□□□ 0.4
SMN2-215ENST00000628696 PHGDHO43175 533 aaKnown RBP17.54■□□□□ 0.4
SMN2-215ENST00000628696 NADKO95544 446 aaPredicted RBP17.54■□□□□ 0.4
SMN2-215ENST00000628696 ETHE1O95571 254 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 CCDC166P0CW27 439 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 CCL3P10147 92 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 GGT5P36269 586 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 MSH2P43246 934 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 POU4F1Q01851 419 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 IRF8Q02556 426 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 ASPHQ12797 758 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 LAPTM5Q13571 262 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 PDK4Q16654 411 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 PAGE2BQ5JRK9 111 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 RTL6Q6ICC9 239 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 SULT1C3Q6IMI6 304 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 ZNF793Q6ZN11 406 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 SRFBP1Q8NEF9 429 aaKnown RBP17.54■□□□□ 0.4
SMN2-215ENST00000628696 OR8K3Q8NH51 312 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 EXT2Q93063 718 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 EFCAB11Q9BUY7 163 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 ROGDIQ9GZN7 287 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 SLC24A3Q9HC58 644 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 SEMA4BQ9NPR2 832 aaPredicted RBP17.54■□□□□ 0.4
SMN2-215ENST00000628696 TRMT1Q9NXH9 659 aaKnown RBP17.54■□□□□ 0.4
SMN2-215ENST00000628696 Q9UFV3 132 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 FAM215AQ9Y5M1 114 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 FREM3P0C091 2139 aa17.54■□□□□ 0.4
SMN2-215ENST00000628696 A0A1B0GVC2 190 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 AQP7O14520 342 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 ZSCAN12O43309 604 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 CCNT2O60583 730 aaKnown RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 SEC31AO94979 1220 aaKnown RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 TCP1P17987 556 aaKnown RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 CD22P20273 847 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 CPN2P22792 545 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 ATP5A1P25705 553 aaKnown RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 DNAJA1P31689 397 aaKnown RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 PIGAP37287 484 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 CHIT1Q13231 466 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 OR4D1Q15615 310 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 AP5B1Q2VPB7 878 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 WLSQ5T9L3 541 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 UBE3DQ7Z6J8 389 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 LIX1LQ8IVB5 337 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 OR4N5Q8IXE1 308 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 ZBED8Q8IZ13 594 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 ACOT4Q8N9L9 421 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 ZNF721Q8TF20 911 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 ANKRD9Q96BM1 317 aaPredicted RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 SARAFQ96BY9 339 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 WDR34Q96EX3 536 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 TSPAN17Q96FV3 270 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 KRT12Q99456 494 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 TBCDQ9BTW9 1192 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 CNPPD1Q9BV87 410 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 SMYD2Q9NRG4 433 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 PRRC2AP48634 2157 aaKnown RBP17.53■□□□□ 0.4
SMN2-215ENST00000628696 ARHGAP21Q5T5U3 1957 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 NCKAP5O14513 1909 aa17.53■□□□□ 0.4
SMN2-215ENST00000628696 SAP18O00422 153 aaKnown RBP17.52■□□□□ 0.4
SMN2-215ENST00000628696 SUSD5O60279 629 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 WDR1O75083 606 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 TGFB1P01137 390 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 S100BP04271 92 aaPredicted RBP17.52■□□□□ 0.4
SMN2-215ENST00000628696 PCNAP12004 261 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 COX7A2P14406 83 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 ADH7P40394 386 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 IST1P53990 364 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 DLX5P56178 289 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 FOXO1Q12778 655 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 PIGGQ5H8A4 983 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 CDKL4Q5MAI5 379 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 C1orf185Q5T7R7 199 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 WDR53Q7Z5U6 358 aaPredicted RBP17.52■□□□□ 0.4
SMN2-215ENST00000628696 MYRIPQ8NFW9 859 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 DGAT2Q96PD7 388 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 MS4A8Q9BY19 250 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 DNAJB12Q9NXW2 375 aaKnown RBP17.52■□□□□ 0.4
SMN2-215ENST00000628696 TXNDC16Q9P2K2 825 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 ATG4BQ9Y4P1 393 aa17.52■□□□□ 0.4
SMN2-215ENST00000628696 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.52■□□□□ 0.4
SMN2-215ENST00000628696 ITPR3Q14573 2671 aa17.52■□□□□ 0.39
SMN2-215ENST00000628696 TRGV5A0A0B4J1U4 118 aa17.51■□□□□ 0.39
SMN2-215ENST00000628696 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
SMN2-215ENST00000628696 WISP3O95389 354 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms