RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SLC13A4Q9UKG4 626 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 V9GYQ6 96 aa11.86□□□□□ -0.51
SYNGAP1-207ENST00000628646 IGHV1OR21-1A0A087WYE8 117 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 SCELO95171 688 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 PRIM2P49643 509 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 GSK3BP49841 420 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ITGA1P56199 1179 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 OLR1P78380 273 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF33BQ06732 778 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 TP53BP2Q13625 1128 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 SPRED1Q7Z699 444 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZFAND4Q86XD8 727 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 NRROSQ86YC3 692 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR56A3Q8NH54 315 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 CD180Q99467 661 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 HCN3Q9P1Z3 774 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 IFT80Q9P2H3 777 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 H0YGG7 62 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RFXANKO14593 260 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 LILRB5O75023 590 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 EFNA1P20827 205 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ARF3P61204 181 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 GPR19Q15760 415 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF621Q6ZSS3 439 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZDHHC13Q8IUH4 622 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 LIX1Q8N485 282 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 DPP10Q8N608 796 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 CENPNQ96H22 339 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RBM18Q96H35 190 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 KIF17Q9P2E2 1029 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RPS6KA6Q9UK32 745 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 FAM32AQ9Y421 112 aaKnown RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RP1P56715 2156 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 DCDC2BA2VCK2 349 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 A8MUA0 341 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 C5orf58C9J3I9 102 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 CLOCKO15516 846 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 BMP10O95393 424 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 GNAO1P09471 354 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 IFNA8P32881 189 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ALDH3B2P48448 385 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ATP6AP1Q15904 470 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 HKDC1Q2TB90 917 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 KIAA1614Q5VZ46 1190 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 ERICH5Q6P6B1 374 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RAB11FIP2Q7L804 512 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 KLHDC8AQ8IYD2 350 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 EID3Q8N140 333 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 PACRGLQ8N7B6 248 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 TRIM45Q9H8W5 580 aaPredicted RBP11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 RALGAPA1Q6GYQ0 2036 aa11.85□□□□□ -0.51
SYNGAP1-207ENST00000628646 GLOD5A6NK44 160 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 HAT1O14929 419 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 ALOX12P18054 663 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 ANXA11P50995 505 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 SELPLGQ14242 412 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 HEPACAMQ14CZ8 416 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 ABRAXAS2Q15018 415 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 GRHL2Q6ISB3 625 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 NANOGP8Q6NSW7 305 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 BORAQ6PGQ7 559 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 RNF175Q8N4F7 328 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 OR8K5Q8NH50 307 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 RPF2Q9H7B2 306 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 NANOGQ9H9S0 305 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 FARSBQ9NSD9 589 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 A0A0A6YYC8 382 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 H3BNH8 94 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 I3L1I5 382 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 PRAMEF10O60809 474 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 EPORP19235 508 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 NT5EP21589 574 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 SERPINB1P30740 379 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 FASLGP48023 281 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 VAC14Q08AM6 782 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 HYAL2Q12891 473 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 RNF165Q6ZSG1 346 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 RMND5BQ96G75 393 aaPredicted RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 CGREF1Q99674 301 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 CEPT1Q9Y6K0 416 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 NOBOXO60393 691 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 PRPS1L1P21108 318 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 CPTPQ5TA50 214 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 TMEM71Q6P5X7 295 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 RIMKLAQ8IXN7 391 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 DGCR14Q96DF8 476 aaKnown RBP11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 CCDC74BQ96LY2 380 aa11.84□□□□□ -0.51
SYNGAP1-207ENST00000628646 ELOVL7A1L3X0 281 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 UPK1AO00322 258 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 PCDHGA12O60330 932 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 CSO75390 466 aaKnown RBP11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 GGT5P36269 586 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 MANFP55145 182 aaKnown RBP11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 PPP1CAP62136 330 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 ID2Q02363 134 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms