RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
MECP2-217ENST00000628176 PCDHGA5Q9Y5G8 931 aa13.54□□□□□ -0.24
MECP2-217ENST00000628176 CORINQ9Y5Q5 1042 aa13.54□□□□□ -0.24
MECP2-217ENST00000628176 CFAP20Q9Y6A4 193 aaKnown RBP13.54□□□□□ -0.24
MECP2-217ENST00000628176 PRAMEF33A0A0G2JMD5 474 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 SCN2BO60939 215 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 HIST1H2AGP0C0S8 130 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 JUPP14923 745 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 HIST1H2ADP20671 130 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 PPIBP23284 216 aaKnown RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 HOXD12P35452 270 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ACTR1BP42025 376 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 SERPINB10P48595 397 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 MLLT10P55197 1068 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ACTR1AP61163 376 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 NHLH1Q02575 133 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 LRRC74AQ0VAA2 488 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 FADDQ13158 208 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 RAPSNQ13702 412 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 OXA1LQ15070 435 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 CPSF6Q16630 551 aaKnown RBP eCLIP13.53□□□□□ -0.24
MECP2-217ENST00000628176 DEFB133Q30KQ1 61 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 SGO1Q5FBB7 561 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 FRG2Q64ET8 278 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 FAHD1Q6P587 224 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 UBE2R2Q712K3 238 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 CBLL1Q75N03 491 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 CAMKMTQ7Z624 323 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 TAF8Q7Z7C8 310 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 IGFN1Q86VF2 1251 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ZZZ3Q8IYH5 903 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ZBTB8BQ8NAP8 495 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 PHF10Q8WUB8 498 aaKnown RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 SGCDQ92629 289 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 HIST1H2AHQ96KK5 128 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 FRG2BQ96QU4 278 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 SIGLEC11Q96RL6 698 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 HIST1H2AJQ99878 128 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 INPP5KQ9BT40 448 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 H2AFJQ9BTM1 129 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 EPS8L2Q9H6S3 715 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 DNAJC11Q9NVH1 559 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 SCHIP1Q9P0W5 487 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 NCDNQ9UBB6 729 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 CORO2BQ9UQ03 480 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 PCDHGA10Q9Y5H3 936 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 KRT87PA6NCN2 255 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 PABPN1LA6NDY0 278 aaKnown RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 PIAS2O75928 621 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 INMTO95050 263 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 KCNK5O95279 499 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 IDSP22304 550 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 TGM1P22735 817 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 KDELR2P33947 212 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 CLCNKAP51800 687 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ITGA1P56199 1179 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 TEKQ02763 1124 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ILF3Q12906 894 aaKnown RBP eCLIP13.53□□□□□ -0.247e-8■■□□□ 13.9
MECP2-217ENST00000628176 PROX2Q3B8N5 592 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 MLIPQ5VWP3 458 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 NOXRED1Q6NXP6 359 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ASCL5Q7RTU5 278 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ZNF551Q7Z340 670 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 B3GNT8Q7Z7M8 397 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 C10orf111Q8N326 155 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 OR7A2PQ8NGA2 310 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 MCOLN3Q8TDD5 553 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 FCGR1BQ92637 280 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 ZNF300Q96RE9 604 aaPredicted RBP13.53□□□□□ -0.24
MECP2-217ENST00000628176 NRTNQ99748 197 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 SEMA4GQ9NTN9 838 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 VNN3Q9NY84 501 aa13.53□□□□□ -0.24
MECP2-217ENST00000628176 CEP250Q9BV73 2442 aa13.52□□□□□ -0.24
MECP2-217ENST00000628176 RP1P56715 2156 aa13.52□□□□□ -0.24
MECP2-217ENST00000628176 OR52A4PA6NMU1 304 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 YY2O15391 372 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 GDF9O60383 454 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 FABP3P05413 133 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 ALOX5P09917 674 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 SLC35G4P0C7Q5 338 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 CYP2A7P20853 494 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 PRKACGP22612 351 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 OPRL1P41146 370 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 DAPP51397 102 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 IL5RAQ01344 420 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 ELOAQ14241 798 aaKnown RBP13.52□□□□□ -0.25
MECP2-217ENST00000628176 DGUOKQ16854 277 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 ZXDCQ2QGD7 858 aaPredicted RBP13.52□□□□□ -0.25
MECP2-217ENST00000628176 RABEPKQ7Z6M1 372 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 GPBAR1Q8TDU6 330 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.25
MECP2-217ENST00000628176 FBXL8Q96CD0 374 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 C11orf24Q96F05 449 aaPredicted RBP13.52□□□□□ -0.25
MECP2-217ENST00000628176 DACH2Q96NX9 599 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 EPYCQ99645 322 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 DGCR6LQ9BY27 220 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 GSDMCQ9BYG8 508 aa13.52□□□□□ -0.25
MECP2-217ENST00000628176 ASPSCR1Q9BZE9 553 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms