RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ATP5F1P24539 256 aaPredicted RBP11.61□□□□□ -0.55
LINC00963-217ENST00000624009 HSD3B2P26439 372 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 GALNSP34059 522 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 BSGP35613 385 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 CD96P40200 585 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 CYB561P49447 251 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 HNRNPFP52597 415 aaKnown RBP11.61□□□□□ -0.55
LINC00963-217ENST00000624009 RPS13P62277 151 aaKnown RBP11.61□□□□□ -0.55
LINC00963-217ENST00000624009 TNFRSF17Q02223 184 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 IFT88Q13099 833 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 SLAMF1Q13291 335 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 DDX39BQ13838 428 aaKnown RBP11.61□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF766Q5HY98 468 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 PAGE2Q7Z2X7 111 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 MILR1Q7Z6M3 343 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 GPR180Q86V85 440 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 GPALPP1Q8IXQ4 340 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 LRRN4CLQ8ND94 238 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 TMEM52Q8NDY8 209 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 TRPC4APQ8TEL6 797 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 L3HYPDHQ96EM0 354 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 TAAR6Q96RI8 345 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF382Q96SR6 550 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 ALOXE3Q9BYJ1 711 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 RPF2Q9H7B2 306 aaKnown RBP11.61□□□□□ -0.55
LINC00963-217ENST00000624009 NMRK1Q9NWW6 199 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 MAP10Q9P2G4 905 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 TRPS1Q9UHF7 1281 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 SNX6Q9UNH7 406 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 PKDREJQ9NTG1 2253 aa11.61□□□□□ -0.55
LINC00963-217ENST00000624009 WIPF3A6NGB9 483 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 RTCAO00442 366 aaKnown RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 PROM1O43490 865 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 DYRK3O43781 588 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 NEURL1O76050 574 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ZFAND5O76080 213 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 IMPDH1P20839 514 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 HSD17B3P37058 310 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 STT3AP46977 705 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 HLCSP50747 726 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 PRKAA2P54646 552 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 CLCQ05315 142 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 OR1C1Q15619 314 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 CCDC153Q494R4 210 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ZNF678Q5SXM1 525 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 TEX35Q5T0J7 233 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 SH2D5Q6ZV89 423 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ST13P4Q8IZP2 240 aaPredicted RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 PTPMT1Q8WUK0 201 aaPredicted RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 NCLNQ969V3 563 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ANKRD9Q96BM1 317 aaPredicted RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ART5Q96L15 291 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 C5orf34Q96MH7 638 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 NSUN5Q96P11 429 aaKnown RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ELOVL6Q9H5J4 265 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 CDCP1Q9H5V8 836 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ANKZF1Q9H8Y5 726 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 PNO1Q9NRX1 252 aaKnown RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 TMEM216Q9P0N5 145 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 LRFN1Q9P244 771 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 YARS2Q9Y2Z4 477 aaKnown RBP11.6□□□□□ -0.55
LINC00963-217ENST00000624009 ASB4Q9Y574 426 aa11.6□□□□□ -0.55
LINC00963-217ENST00000624009 TRBV11-1A0A0K0K1C0 115 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CCDC151A5D8V7 595 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 DLX3O60479 287 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 GLRA3O75311 464 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 GUCY1B2O75343 617 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SLC25A12O75746 678 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 AGFG2O95081 481 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 ZIC2O95409 532 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 ETHE1O95571 254 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 IFNA16P05015 189 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 NUDT17P0C025 328 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 PYGBP11216 843 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 TPP2P29144 1249 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CRHR1P34998 444 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 ARL1P40616 181 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CCT5P48643 541 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 PKNOX1P55347 436 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 PLIN5Q00G26 463 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 LCP2Q13094 533 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 MRPL49Q13405 166 aaKnown RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SPRED3Q2MJR0 410 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 FCRLBQ6BAA4 426 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 TTC19Q6DKK2 380 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 SLC25A25Q6KCM7 469 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 WDR93Q6P2C0 686 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 CYP20A1Q6UW02 462 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 HSDL2Q6YN16 418 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 METTL4Q8N3J2 472 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 RIBC1Q8N443 379 aaPredicted RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 POGLUT1Q8NBL1 392 aa11.59□□□□□ -0.55
LINC00963-217ENST00000624009 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
LINC00963-217ENST00000624009 OR4F6Q8NGB9 312 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 326.2 ms