RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 PRR5P85299 388 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 MYBPC1Q00872 1141 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 SPIDRQ14159 915 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 CEBPEQ15744 281 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 CCDC85BQ15834 202 aaPredicted RBP15.51■□□□□ 0.07
LDB3-208ENST00000623007 PRAMEF8Q5VWM4 474 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 PRAMEF7Q5VXH5 474 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 SLC48A1Q6P1K1 146 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 TTC33Q6PID6 262 aaPredicted RBP15.51■□□□□ 0.07
LDB3-208ENST00000623007 CEACAM20Q6UY09 585 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 USP51Q70EK9 711 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 PLD3Q8IV08 490 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 UBALD2Q8IYN6 164 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 EXOSC8Q96B26 276 aaKnown RBP15.51■□□□□ 0.07
LDB3-208ENST00000623007 ZNF607Q96SK3 696 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 C3orf14Q9HBI5 128 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 TEX10Q9NXF1 929 aaPredicted RBP15.51■□□□□ 0.07
LDB3-208ENST00000623007 MAP4K5Q9Y4K4 846 aa15.51■□□□□ 0.07
LDB3-208ENST00000623007 MYO1GB0I1T2 1018 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 MAP3K13O43283 966 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 B3GALT2O43825 422 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 SERPINB7O75635 380 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 BMP10O95393 424 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 CSF2P04141 144 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 IFI6P09912 130 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 PABPC4LP0CB38 370 aaKnown RBP15.5■□□□□ 0.07
LDB3-208ENST00000623007 JUNDP17535 347 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 EFNA1P20827 205 aaPredicted RBP15.5■□□□□ 0.07
LDB3-208ENST00000623007 PCBP3P57721 371 aaKnown RBP15.5■□□□□ 0.07
LDB3-208ENST00000623007 HHEXQ03014 270 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 EEF1A2Q05639 463 aaKnown RBP15.5■□□□□ 0.07
LDB3-208ENST00000623007 ZNF793Q6ZN11 406 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 C6orf120Q7Z4R8 191 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 BAHD1Q8TBE0 780 aaPredicted RBP15.5■□□□□ 0.07
LDB3-208ENST00000623007 ZDHHC1Q8WTX9 485 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 AMDHD1Q96NU7 426 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 OR2A5Q96R48 311 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 TRIM4Q9C037 500 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 RUBCNLQ9H714 662 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 LYRM4Q9HD34 91 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 DDX18Q9NVP1 670 aaKnown RBP15.5■□□□□ 0.07
LDB3-208ENST00000623007 P2RX2Q9UBL9 471 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 ENOPH1Q9UHY7 261 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 PILRAQ9UKJ1 303 aa15.5■□□□□ 0.07
LDB3-208ENST00000623007 A0A087WXM4 84 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 PROM1O43490 865 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 UGT2B11O75310 529 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 C9P02748 559 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 NR2F6P10588 404 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 NME1P15531 152 aaKnown RBP15.49■□□□□ 0.07
LDB3-208ENST00000623007 POLR2CP19387 275 aaPredicted RBP15.49■□□□□ 0.07
LDB3-208ENST00000623007 FASLGP48023 281 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 KHKP50053 298 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 KCNJ10P78508 379 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 KCNC4Q03721 635 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 LIN52Q52LA3 116 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 TMEM31Q5JXX7 168 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 RNF44Q7L0R7 432 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 KRT73Q86Y46 540 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 SETD9Q8NE22 299 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 TSPAN14Q8NG11 270 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 OR8K5Q8NH50 307 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 SLC37A2Q8TED4 501 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 TPD52L3Q96J77 140 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 NRTNQ99748 197 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 ORAI3Q9BRQ5 295 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 KLHL31Q9H511 634 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 HRASLS2Q9NWW9 162 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 BLOC1S6Q9UL45 172 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 PNMA8BQ9ULN7 279 aaPredicted RBP15.49■□□□□ 0.07
LDB3-208ENST00000623007 HSPE1-MOB4S4R3N1 261 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 PLXND1Q9Y4D7 1925 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 FANCMQ8IYD8 2048 aa15.49■□□□□ 0.07
LDB3-208ENST00000623007 OR5K3A6NET4 321 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 SCAMP1O15126 338 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 ASNA1O43681 348 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 SOX30O94993 753 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 AGR2O95994 175 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 FHP07954 510 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 SMIM10L1P0DMW3 83 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 ITGAMP11215 1152 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 FOSL2P15408 326 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 MAGP20916 626 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 NCBP2P52298 156 aaKnown RBP eCLIP15.48■□□□□ 0.07
LDB3-208ENST00000623007 HSPB3Q12988 150 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 FZD5Q13467 585 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 TOP3AQ13472 1001 aaPredicted RBP15.48■□□□□ 0.07
LDB3-208ENST00000623007 APOFQ13790 326 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 COX20Q5RI15 118 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 FBXO42Q6P3S6 717 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 VN1R4Q7Z5H5 301 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 C8orf59Q8N0T1 100 aaPredicted RBP15.48■□□□□ 0.07
LDB3-208ENST00000623007 OR10G6Q8NH81 332 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 NFKBIDQ8NI38 313 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 MIPOL1Q8TD10 442 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 UTP15Q8TED0 518 aaKnown RBP15.48■□□□□ 0.07
LDB3-208ENST00000623007 CLDN23Q96B33 292 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 SMIM10Q96HG1 83 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 SLC35G5Q96KT7 338 aa15.48■□□□□ 0.07
LDB3-208ENST00000623007 MYCBPQ99417 103 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms