RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 NPC1O15118 1278 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 LGI1O95970 557 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 FHP07954 510 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 CLEC2LP0C7M8 214 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 MSL3P1P0C860 447 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 SOAT1P35610 550 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 OPRD1P41143 372 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 MLLT3P42568 568 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 FLT3LGP49771 235 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 C2orf80Q0P641 193 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 HNRNPA0Q13151 305 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 VEPH1Q14D04 833 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 TMPRSS11BQ86T26 416 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 IFNL1Q8IU54 200 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 LILRA3Q8N6C8 439 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 C16orf78Q8WTQ4 265 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 TMEM245Q9H330 911 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 ZDHHC6Q9H6R6 413 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 FAM25AB3EWG3 89 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 FAM25CB3EWG5 89 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 FAM25GB3EWG6 89 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 IL1AP01583 271 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 PREPP48147 710 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 ACLYP53396 1101 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 GNG2P59768 71 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 HOXC5Q00444 222 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 MFSD4BQ5TF39 518 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 PPP2R2DQ66LE6 453 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 FAM71E1Q6IPT2 247 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 GDPD1Q8N9F7 314 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 REPS1Q96D71 796 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 RNF121Q9H920 327 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 ACOXLQ9NUZ1 547 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 LRFN2Q9ULH4 789 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 PLXND1Q9Y4D7 1925 aa18.65■□□□□ 0.58
PDLIM3-212ENST00000620787 A0A1W2PQL4 384 aaPredicted RBP18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 HEPACAM2A8MVW5 462 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 SAP18O00422 153 aaKnown RBP18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 SEMA7AO75326 666 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 ABLIM3O94929 683 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 EFEMP2O95967 443 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 ELAVL4P26378 380 aaKnown RBP18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 DSTNP60981 165 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 CRHR2Q13324 411 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 TXNDC8Q6A555 127 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 C22orf39Q6P5X5 142 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 CEACAM20Q6UY09 585 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 CLDN22Q8N7P3 220 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 DBF4BQ8NFT6 615 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 GRPEL2Q8TAA5 225 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 ZNF461Q8TAF7 563 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 FRMD6Q96NE9 622 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 RSPO3Q9BXY4 272 aaPredicted RBP18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 MYNNQ9NPC7 610 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 TET1Q8NFU7 2136 aa18.64■□□□□ 0.58
PDLIM3-212ENST00000620787 FABP12A6NFH5 140 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 PLA2G10O15496 165 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 AP2A2O94973 939 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 CATP04040 527 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 CSF2P04141 144 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 KIR2DL3P43628 341 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 XKP51811 444 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 CD83Q01151 205 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 RPS26P11Q5JNZ5 115 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 IER5LQ5T953 404 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 SAXO2Q658L1 398 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 FAM92BQ6ZTR7 304 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 NPAS4Q8IUM7 802 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 GPR65Q8IYL9 337 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 OR9Q1Q8NGQ5 310 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 JPH3Q8WXH2 748 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 DIRAS2Q96HU8 199 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 ZIC5Q96T25 663 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 GULP1Q9UBP9 304 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 TMCC3Q9ULS5 477 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 MGAT4BQ9UQ53 548 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 SH2B3Q9UQQ2 575 aa18.64■□□□□ 0.57
PDLIM3-212ENST00000620787 MYL12BO14950 172 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 TMCC2O75069 709 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 TAS2R50P59544 299 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 C1DQ13901 141 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 FLYWCH1Q4VC44 716 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 SYTL3Q4VX76 610 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 FAM209AQ5JX71 171 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 PDZK1Q5T2W1 519 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 REEP3Q6NUK4 255 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 CASP12Q6UXS9 341 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 DNAJB7Q7Z6W7 309 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 SLC30A8Q8IWU4 369 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 TCEANCQ8N8B7 351 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 IL17RCQ8NAC3 791 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 GPR32P1Q8NGA4 272 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 FIBINQ8TAL6 211 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 NELL2Q99435 816 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 SYT17Q9BSW7 474 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 ZNF334Q9HCZ1 680 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 DMRT3Q9NQL9 472 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 A0A1W2PRB8 838 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 ERVH48-1M5A8F1 160 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 POLR1CO15160 346 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms