RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 BCAS2O75934 225 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 OR7A10O76100 309 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 MRPL3P09001 348 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 TAS1R1Q7RTX1 841 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF572Q7Z3I7 529 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GPR137CQ8N3F9 429 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 WDTC1Q8N5D0 677 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 DNAAF1Q8NEP3 725 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 OR5T2Q8NGG2 359 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 FGF13Q92913 245 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 PEX13Q92968 403 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GAL3ST3Q96A11 431 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 CHIAQ9BZP6 476 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 MTG2Q9H4K7 406 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ZBTB26Q9HCK0 441 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 HCN4Q9Y3Q4 1203 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 CACNA1FO60840 1977 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 C2orf92A0A1B0GVN3 265 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 IL1RNP18510 177 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GLP1RP43220 463 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ARG2P78540 354 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GALNT10Q86SR1 603 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ABHD5Q8WTS1 349 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 NSUN5Q96P11 429 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF395Q9H8N7 513 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM184CQ9NVA4 438 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 VSTM2BA6NLU5 285 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 SEMA3DO95025 777 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 S1PR4O95977 384 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 ERCC1P07992 297 aaPredicted RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 CD36P16671 472 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GPR143P51810 404 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 NUDT6P53370 316 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 UBE2NP61088 152 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 GRIN2CQ14957 1233 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 CARM1Q86X55 608 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 NSMAFQ92636 917 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 CXorf21Q9HAI6 301 aa10.91□□□□□ -0.66
CLIP1-219ENST00000620786 C14orf166Q9Y224 244 aaKnown RBP10.91□□□□□ -0.66
CLIP1-219ENST00000620786 BRINP1O60477 761 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 MAPK3P27361 379 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SLC15A1P46059 708 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 CDKN2DP55273 166 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 LRRTM3Q86VH5 581 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ZFAND4Q86XD8 727 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 PLD6Q8N2A8 252 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SPERTQ8NA61 448 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 BIRC7Q96CA5 298 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 DDIT4LQ96D03 193 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 MS4A4AQ96JQ5 239 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 LPAR4Q99677 370 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 PARPBPQ9NWS1 579 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 PFDN2Q9UHV9 154 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 MGAT4BQ9UQ53 548 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 PDLIM1O00151 329 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 FPR1P21462 350 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 MSX1P28360 303 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 CLDN2P57739 230 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 PPP1R8Q12972 351 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 MALLQ13021 153 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 DOC2AQ14183 400 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TSTQ16762 297 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 CCDC107Q8WV48 283 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 HAPLN2Q9GZV7 340 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TM9SF3Q9HD45 589 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TMPRSS11EQ9UL52 423 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SLC7A11Q9UPY5 501 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 LOC100130705A0A1B0GUX0 176 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SLC35F4A4IF30 521 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 A6NLC8 198 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ADORA3P0DMS8 318 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 HSD3B1P14060 373 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 HSD3B2P26439 372 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 CD6P30203 668 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 TNFRSF4P43489 277 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 GNG2P59768 71 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 NIPAL4Q0D2K0 466 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SLC10A2Q12908 348 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 CCSAPQ6IQ19 270 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ZC3H3Q8IXZ2 948 aaKnown RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ERMAPQ96PL5 475 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 HEBP1Q9NRV9 189 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF221Q9UK13 617 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 ARL6IP5O75915 188 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 NPPAP01160 153 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 IFNA21P01568 189 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 DRD2P14416 443 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 XRCC1P18887 633 aaPredicted RBP10.9□□□□□ -0.66
CLIP1-219ENST00000620786 FECHP22830 423 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SLC18A2Q05940 514 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SCAPQ12770 1279 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 BTBD16Q32M84 506 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 RABL3Q5HYI8 236 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 FIGNL1Q6PIW4 674 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 SSX6Q7RTT6 188 aa10.9□□□□□ -0.66
CLIP1-219ENST00000620786 PLCZ1Q86YW0 608 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms