RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 NNATQ16517 81 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 SLC5A12Q1EHB4 618 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 LYSMD4Q5XG99 296 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 BHLHE41Q9C0J9 482 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-213ENST00000620219 CCL27Q9Y4X3 112 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ASCC3Q8N3C0 2202 aaKnown RBP14.94□□□□□ -0.02
CPSF1-213ENST00000620219 TRANK1O15050 2925 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 IGHV1OR15-9A0A0B4J2B8 117 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ANKRD28O15084 1053 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 GPR37L1O60883 481 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF155Q12901 538 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-213ENST00000620219 SATL1Q86VE3 508 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 SPEM1Q8N4L4 309 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 AVL9Q8NBF6 648 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 GPR151Q8TDV0 419 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 STON2Q8WXE9 905 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 PYURFQ96I23 114 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ANKRA2Q9H9E1 313 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 PCM1Q15154 2024 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 CACNA1HO95180 2353 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 KCNE1BA0A087WTH5 132 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 A0A0A6YYC8 382 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-213ENST00000620219 I3L1I5 382 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-213ENST00000620219 GGT1P19440 569 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 DDCP20711 480 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 REEP5Q00765 189 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 CYBRD1Q53TN4 286 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 OR5D16Q8NGK9 328 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 PEX11GQ96HA9 241 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 NEUROD4Q9HD90 331 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 POT1Q9NUX5 634 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF451Q9Y4E5 1061 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 CLDN4O14493 209 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 OR10H3O60404 316 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 RDH16O75452 317 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 UBXN7O94888 489 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 RYKP34925 604 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF33BQ06732 778 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 SLC14A1Q13336 389 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 C16orf72Q14CZ0 275 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 TMEM35AQ53FP2 167 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF385BQ569K4 471 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 PHF19Q5T6S3 580 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 MAP3K3Q99759 626 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 MYRFQ9Y2G1 1151 aa14.94□□□□□ -0.02
CPSF1-213ENST00000620219 PTPRSQ13332 1948 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 OBSL1O75147 1896 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 GVINP1Q7Z2Y8 2422 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 YY2O15391 372 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 ERV3-1Q14264 604 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 RGNQ15493 299 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 GPR68Q15743 365 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 SLC36A4Q6YBV0 504 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 TTLL10Q6ZVT0 673 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 OR5P2Q8WZ92 322 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 SMPD3Q9NY59 655 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-213ENST00000620219 RAB26Q9ULW5 256 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 ATG4BQ9Y4P1 393 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 TMPRSS11DO60235 418 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 MATN1P21941 496 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 RPS26P11Q5JNZ5 115 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-213ENST00000620219 OR4K14Q8NGD5 310 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 TRAPPC9Q96Q05 1148 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 PAIP1Q9H074 479 aaKnown RBP14.93□□□□□ -0.02
CPSF1-213ENST00000620219 TM9SF3Q9HD45 589 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 RASSF1Q9NS23 344 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 SNX11Q9Y5W9 270 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 SCN2AQ99250 2005 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 PCSK2P16519 638 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 ABRAXAS1Q6UWZ7 409 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 OLIG3Q7RTU3 272 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 TSPAN14Q8NG11 270 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 NECAB3Q96P71 396 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-213ENST00000620219 MAPKAP1Q9BPZ7 522 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 ROGDIQ9GZN7 287 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 KAT8Q9H7Z6 458 aaKnown RBP14.93□□□□□ -0.02
CPSF1-213ENST00000620219 PDE7BQ9NP56 450 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 MYNNQ9NPC7 610 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 UBAP1Q9NZ09 502 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 WNT16Q9UBV4 365 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 DENND4CQ5VZ89 1909 aa14.93□□□□□ -0.02
CPSF1-213ENST00000620219 A0A0J9YY10 115 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 TNFRSF11BO00300 401 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 KIF1CO43896 1103 aaKnown RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 IFNW1P05000 195 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 FURINP09958 794 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 TPP2P29144 1249 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 FZD2Q14332 565 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ZNHIT3Q15649 155 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 C1orf189Q5VU69 101 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 C10orf111Q8N326 155 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 AMER3Q8N944 861 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 BPIFB6Q8NFQ5 453 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 GTPBP3Q969Y2 492 aaKnown RBP14.92□□□□□ -0.02
CPSF1-213ENST00000620219 KRT84Q9NSB2 600 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 DNAJB9Q9UBS3 223 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 C3orf18Q9UK00 162 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 ZNF232Q9UNY5 417 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 A0A0C4DFX4 3053 aa14.92□□□□□ -0.02
CPSF1-213ENST00000620219 METTL12A8MUP2 240 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms