RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CT55Q8WUE5 264 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 NRG4Q8WWG1 115 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 RERGQ96A58 199 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ROPN1LQ96C74 230 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 MAELQ96JY0 434 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CDK15Q96Q40 435 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 MESP1Q9BRJ9 268 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 SLC25A23Q9BV35 468 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 MECRQ9BV79 373 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 REPIN1Q9BWE0 567 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GATA5Q9BWX5 397 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C1QTNF3Q9BXJ4 246 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 YTHDF1Q9BYJ9 559 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TGIF2Q9GZN2 237 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C20orf27Q9GZN8 174 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GSTO2Q9H4Y5 243 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ACTL8Q9H568 366 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 NOL11Q9H8H0 719 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 SEMA3GQ9NS98 782 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C14orf105Q9NVL8 296 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TUBA8Q9NY65 449 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GPRC5BQ9NZH0 403 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ARMCX1Q9P291 453 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 NDOR1Q9UHB4 597 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GPN3Q9UHW5 284 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CROTQ9UKG9 612 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TCFL5Q9UL49 500 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 DYRK1BQ9Y463 629 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 MRPS18BQ9Y676 258 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 KCNMB2Q9Y691 235 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 KCNE2Q9Y6J6 123 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 DOPEY1Q5JWR5 2465 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 NOTCH2Q04721 2471 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 IGLV3-12A0A075B6K2 115 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 A0A0G2JN53 185 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 HYKKA2RU49 373 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ANKRD33BA6NCL7 494 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF860A6NHJ4 632 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF701M0R085 212 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 PEX12O00623 359 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 DSCR3O14972 297 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ITM2AO43736 263 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SH3BGRLO75368 114 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CEACAM4O75871 244 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 KLHL18O94889 574 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ETHE1O95571 254 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 S100BP04271 92 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 FURINP09958 794 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SMIM10L1P0DMW3 83 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 UMPSP11172 480 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 IMPDH1P20839 514 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MMP11P24347 488 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SERPINB1P30740 379 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 AHRP35869 848 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 OR1D4P47884 311 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MRPL19P49406 292 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 HTR6P50406 440 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 NEK2P51955 445 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ARFIP1P53367 373 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 NR1H2P55055 460 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 FOXA1P55317 472 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 POLE2P56282 527 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 RPS18P62269 152 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 HERVK_113P63132 956 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MAT1AQ00266 395 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 IRF8Q02556 426 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 FOLH1Q04609 750 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 OCA2Q04671 838 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 BIKQ13323 160 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 PWP1Q13610 501 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TRIM25Q14258 630 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SQLEQ14534 574 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SYT16Q17RD7 645 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 NKAIN1Q4KMZ8 207 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 XKR6Q5GH73 641 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 PIGGQ5H8A4 983 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF678Q5SXM1 525 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ATP1A1-AS1Q5TC04 95 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TMEM214Q6NUQ4 689 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MRPL14Q6P1L8 145 aaKnown RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 IGFL3Q6UXB1 125 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TMIGD1Q6UXZ0 262 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 BNC2Q6ZN30 1099 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TTLL10Q6ZVT0 673 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CHSY3Q70JA7 882 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ASPGQ86U10 573 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 LAS2Q8IYD9 372 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CLYBLQ8N0X4 340 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZNF843Q8N446 348 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 AMER3Q8N944 861 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 L3MBTL4Q8NA19 623 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CLEC1AQ8NC01 280 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 CAMKVQ8NCB2 501 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 TRPV3Q8NET8 790 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 OR7G3Q8NG95 312 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 C9orf43Q8TAL5 461 aaPredicted RBP4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ZCCHC10Q8TBK6 192 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 SLC13A3Q8WWT9 602 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 MR1Q95460 341 aa4.96□□□□□ -1.62
SHMT1-211ENST00000618902 ASB9Q96DX5 294 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms