RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 CLMPQ9H6B4 373 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 TRIM45Q9H8W5 580 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MS4A12Q9NXJ0 267 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 RPS6KB2Q9UBS0 482 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZNF232Q9UNY5 417 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ERGIC3Q9Y282 383 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SPEGQ15772 3267 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZSWIM8A7E2V4 1837 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MRPL3P09001 348 aaKnown RBP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 PABPC4LP0CB38 370 aaKnown RBP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MATN1P21941 496 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 RPS3P23396 243 aaKnown RBP eCLIP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DLX2Q07687 328 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZNF77Q15935 545 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MLIPQ5VWP3 458 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 LHFPL3Q86UP9 236 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CARM1Q86X55 608 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CBARPQ8N350 705 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 AMER3Q8N944 861 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 UBASH3BQ8TF42 649 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 STARD8Q92502 1023 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ASB16Q96NS5 453 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SLC38A3Q99624 504 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR51I1Q9H343 314 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 KLHL31Q9H511 634 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SPHK1Q9NYA1 384 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SBF1O95248 1867 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CPED1A4D0V7 1026 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FAM25AB3EWG3 89 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FAM25CB3EWG5 89 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FAM25GB3EWG6 89 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 H7C0S8 307 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ALOX5P09917 674 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 GKN3PP0CG01 181 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MC3RP41968 323 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SUOXP51687 545 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 INAQ16352 499 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZNF311Q5JNZ3 666 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 LILRA6Q6PI73 481 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DCP2Q8IU60 420 aaKnown RBP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR8J3Q8NGG0 315 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR52E1Q8NGJ3 308 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 OR9A2Q8NGT5 310 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 RIPOR3Q96MK2 946 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 COLEC10Q9Y6Z7 277 aa14.13□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DENRO43583 198 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 XKP51811 444 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 MRPS15P82914 257 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CTBSQ01459 385 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 XKR7Q5GH72 579 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FAR1Q8WVX9 515 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ZNF597Q96LX8 424 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CPEB1Q9BZB8 566 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SFXN1Q9H9B4 322 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FGF22Q9HCT0 170 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FAM120CQ9NX05 1096 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SCN5AQ14524 2016 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 GPR4P46093 362 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 EIF2B2P49770 351 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ST3GAL4Q11206 333 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SLC14A2Q15849 920 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 TIGD6Q17RP2 521 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ANKRD54Q6NXT1 300 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CEP44Q9C0F1 390 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CDH7Q9ULB5 785 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 PGRMC2O15173 223 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ADAMDEC1O15204 470 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 LCMT2O60294 686 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DUSP7Q16829 419 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 HENMT1Q5T8I9 393 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 COX18Q8N8Q8 333 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ANKFN1Q8N957 763 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 LMX1AQ8TE12 382 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 POLR2J2Q9GZM3 115 aaKnown RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DMRT3Q9NQL9 472 aa14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 PCYT1BQ9Y5K3 369 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CLDN24A6NM45 220 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 HLA-DQA2P01906 255 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 HMGN2P05204 90 aaKnown RBP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DDX6P26196 483 aaKnown RBP eCLIP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 NTSR1P30989 418 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 C1DQ13901 141 aaKnown RBP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 HYAL4Q2M3T9 481 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ERICH5Q6P6B1 374 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 SPATC1Q76KD6 591 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CAMK1GQ96NX5 476 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 FUNDC2Q9BWH2 189 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 C3orf14Q9HBI5 128 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 DCAF13Q9NV06 445 aaKnown RBP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ICE1Q9Y2F5 2266 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 GREB1Q4ZG55 1949 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CAPN5O15484 640 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 HNRNPA1P09651 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 ITGA2P17301 1181 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CSNK2A2P19784 350 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 CD247P20963 164 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 NPRL3Q12980 569 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 NCF4Q15080 339 aa14.11□□□□□ -0.15
TNFRSF11A-206ENST00000617039 GPR19Q15760 415 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms