RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 BTN3A2P78410 334 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 IRF9Q00978 393 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 LAPTM5Q13571 262 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 METTL2BQ6P1Q9 378 aaKnown RBP17.65■□□□□ 0.42
CDX1-202ENST00000616154 CYP4Z2PQ8N1L4 340 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 RIBC1Q8N443 379 aaPredicted RBP17.65■□□□□ 0.42
CDX1-202ENST00000616154 ACBD4Q8NC06 268 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 VMP1Q96GC9 406 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 FAR2Q96K12 515 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 QRFPRQ96P65 431 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 LGALS13Q9UHV8 139 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 ZNF223Q9UK11 482 aaPredicted RBP17.65■□□□□ 0.42
CDX1-202ENST00000616154 CLDN16Q9Y5I7 305 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 ZNF407Q9C0G0 2248 aa17.65■□□□□ 0.42
CDX1-202ENST00000616154 POC1B-GALNT4F8VUJ3 575 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 K7EPI3 171 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 UBXN8O00124 270 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 PEX1O43933 1283 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 CDH16O75309 829 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 ITGA10O75578 1167 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 SASH3O75995 380 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 INHBAP08476 426 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 CNTFP26441 200 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 PTGS2P35354 604 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 MSH2P43246 934 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 SERPINB9P50453 376 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 GPR143P51810 404 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 HSD17B7P56937 341 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 RAB38P57729 211 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 RUNX2Q13950 521 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 SETDB1Q15047 1291 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 XKR6Q5GH73 641 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 PAGE2BQ5JRK9 111 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 C3P1Q6ZMU1 363 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 LAS2Q8IYD9 372 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 TMEM156Q8N614 296 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 SNX31Q8N9S9 440 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 ZFP62Q8NB50 900 aaPredicted RBP17.64■□□□□ 0.41
CDX1-202ENST00000616154 OR2L5Q8NG80 312 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 C16orf52Q8NHV5 167 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 FAM57AQ8TBR7 257 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 C14orf79Q96F83 325 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 ENKD1Q9H0I2 346 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 PRTFDC1Q9NRG1 225 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 PSMC3IPQ9P2W1 217 aaPredicted RBP17.64■□□□□ 0.41
CDX1-202ENST00000616154 FBXW2Q9UKT8 454 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 PPT2Q9UMR5 302 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 TSC22D4Q9Y3Q8 395 aa17.64■□□□□ 0.41
CDX1-202ENST00000616154 DNAJC13O75165 2243 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 HIVEP1P15822 2718 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 C2CD3Q4AC94 2353 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 ANKDD1BA6NHY2 528 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 SUPT3HB4E1H0 165 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 TGFBR3LH3BV60 316 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 ERI3O43414 337 aaKnown RBP17.63■□□□□ 0.41
CDX1-202ENST00000616154 ATP8B1O43520 1251 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 CCNT2O60583 730 aaKnown RBP17.63■□□□□ 0.41
CDX1-202ENST00000616154 SUPT3HO75486 399 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 TYK2P29597 1187 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 IRF8Q02556 426 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 CHIT1Q13231 466 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 CMPK2Q5EBM0 449 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 EPS8L3Q8TE67 593 aaKnown RBP17.63■□□□□ 0.41
CDX1-202ENST00000616154 MZB1Q8WU39 189 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 EXT2Q93063 718 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 NCLNQ969V3 563 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 SDCCAG3Q96C92 435 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 PKNOX2Q96KN3 472 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 REXO4Q9GZR2 422 aaKnown RBP17.63■□□□□ 0.41
CDX1-202ENST00000616154 PNO1Q9NRX1 252 aaKnown RBP17.63■□□□□ 0.41
CDX1-202ENST00000616154 OPTCQ9UBM4 332 aa17.63■□□□□ 0.41
CDX1-202ENST00000616154 HCFC1P51610 2035 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 PHF3Q92576 2039 aaKnown RBP17.62■□□□□ 0.41
CDX1-202ENST00000616154 A0A088AWK7 358 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 A0A0G2JN53 185 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 A0A1B0GTH9 108 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 CLDN4O14493 209 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 B3GALT2O43825 422 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 HS6ST1O60243 411 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 TPOP07202 933 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 ZNF10P21506 573 aaPredicted RBP17.62■□□□□ 0.41
CDX1-202ENST00000616154 PPP2R1BP30154 601 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 SERPINB1P30740 379 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 RFC3P40938 356 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 SSR4P51571 173 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 HNRNPFP52597 415 aaKnown RBP17.62■□□□□ 0.41
CDX1-202ENST00000616154 ALDH18A1P54886 795 aaKnown RBP17.62■□□□□ 0.41
CDX1-202ENST00000616154 IFFO1Q0D2I5 559 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 PCBP2Q15366 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDX1-202ENST00000616154 TNFAIP8L3Q5GJ75 292 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 TECRLQ5HYJ1 363 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 ADNP2Q6IQ32 1131 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 ABHD17CQ6PCB6 329 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 MDGA2Q7Z553 956 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 CD163Q86VB7 1156 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 GPALPP1Q8IXQ4 340 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 ZNF595Q8IYB9 648 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 TMEM52Q8NDY8 209 aa17.62■□□□□ 0.41
CDX1-202ENST00000616154 ZNF473Q8WTR7 871 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms