RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 EIF3IQ13347 325 aaKnown RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TRAM1Q15629 374 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF542PQ5EBM4 170 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 KMT5CQ86Y97 462 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 KLHDC8AQ8IYD2 350 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 FAM47BQ8NA70 645 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR7A2PQ8NGA2 310 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ADAD1Q96M93 576 aaKnown RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 CUTCQ9NTM9 273 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 SLC35A3Q9Y2D2 325 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TLCD2A6NGC4 264 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 NPIPB15A6NHN6 443 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 SCAMP2O15127 329 aaKnown RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 OXSR1O95747 527 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TCEA1P23193 301 aaKnown RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ATP12AP54707 1039 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 DIO3P55073 304 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 NKX3-2P78367 333 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 KCNC4Q03721 635 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TRIM25Q14258 630 aaKnown RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 UGT3A2Q3SY77 523 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 PARM1Q6UWI2 310 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 C5orf46Q6UWT4 87 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR52E1Q8NGJ3 308 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 CDK15Q96Q40 435 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 COQ7Q99807 217 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TBX1O43435 398 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 CDC40O60508 579 aaKnown RBP eCLIP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 PRLP01236 227 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 PON3Q15166 354 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 C5orf22Q49AR2 442 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 DEFB134Q4QY38 66 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 BCL7AQ4VC05 210 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF648Q5T619 568 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TXNRD3NBQ6F5E7 133 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 IQCHQ86VS3 1027 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ANKRD46Q86W74 232 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 DND1Q8IYX4 353 aaKnown RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 PACRGLQ8N7B6 248 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 SGCDQ92629 289 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF570Q96NI8 536 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 SMPD3Q9NY59 655 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 LHX3Q9UBR4 397 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 AP4B1Q9Y6B7 739 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZNF432O94892 652 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 CHRM5P08912 532 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZCCHC18P0CG32 403 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 PRKAR1AP10644 381 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 FNTBP49356 437 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 IL18R1Q13478 541 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TECRLQ5HYJ1 363 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 LARP4Q71RC2 724 aaKnown RBP eCLIP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 MAMDC2Q7Z304 686 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 TMEM17Q86X19 198 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 OR10G2Q8NGC3 310 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 L3HYPDHQ96EM0 354 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 PEX11GQ96HA9 241 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 UCK2Q9BZX2 261 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 ZDHHC18Q9NUE0 388 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 STOX2Q9P2F5 926 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 EGFL7Q9UHF1 273 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 SLC7A11Q9UPY5 501 aa9.32□□□□□ -0.92
TNFRSF9-204ENST00000615230 NOBOXO60393 691 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PDYNP01213 254 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 IL3P08700 152 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 MYOGP15173 224 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SOX9P48436 509 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 CTBSQ01459 385 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 GALNT1Q10472 559 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RPE65Q16518 533 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 MOGQ16653 247 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 HSD11B1LQ7Z5J1 315 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 TMEM135Q86UB9 458 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 CDRT4Q8N9R6 151 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 FRS2Q8WU20 508 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 TPT1P8Q9HAU6 139 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 C1GALT1Q9NS00 363 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 IL17CQ9P0M4 197 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RSL24D1Q9UHA3 163 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 DDCP20711 480 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 GLDCP23378 1020 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RAB38P57729 211 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 IL10RAQ13651 578 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 COL9A3Q14050 684 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 MRPL58Q14197 206 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 NEDD8Q15843 81 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 CRB2Q5IJ48 1285 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 UBAP2Q5T6F2 1119 aaKnown RBP9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 KCTD11Q693B1 232 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 LAIR1Q6GTX8 287 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 NAPRTQ6XQN6 538 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SYT13Q7L8C5 426 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 CADM4Q8NFZ8 388 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PYDC1Q8WXC3 89 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 LRRC58Q96CX6 371 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SLC9B1P1A6NJY1 282 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 RFXAPO00287 272 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 SLC5A12Q1EHB4 618 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 PSAPL1Q6NUJ1 521 aa9.31□□□□□ -0.92
TNFRSF9-204ENST00000615230 KDELC1Q6UW63 502 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms