RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	CHIT1	Q13231	466 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	HIST2H2AA3	Q6FI13	130 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	OPN5	Q6U736	354 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	IL20RB	Q6UXL0	311 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	CHSY3	Q70JA7	882 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	CDH24	Q86UP0	819 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	SNX31	Q8N9S9	440 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	OR5L2	Q8NGL0	311 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	NUBPL	Q8TB37	319 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	SLC2A12	Q8TD20	617 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	UBTD2	Q8WUN7	234 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	SCYL1	Q96KG9	808 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	KRT12	Q99456	494 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	MAPKAP1	Q9BPZ7	522 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	ERP44	Q9BS26	406 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	TTTY12	Q9BZ98	90 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	DEFB127	Q9H1M4	99 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	IL1RL2	Q9HB29	575 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	SH2D2A	Q9NP31	389 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	CD274	Q9NZQ7	290 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	ADGRE2	Q9UHX3	823 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	RNF6	Q9Y252	685 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	SPACA6	W5XKT8	324 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508	C2CD3	Q4AC94	2353 aa		10.31	□□□□□ -0.76
CBWD1-222	ENST00000613508		A0A0G2JMM0	328 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508		A0A1W2PPB8	328 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508		A0A1W2PRS3	328 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	CCDC189	A1A4V9	331 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	FAM187A	A6NFU0	413 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	KIR3DP1	A8MWS1	328 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	BCKDK	O14874	412 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	SUSD5	O60279	629 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	PDE9A	O76083	593 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ETHE1	O95571	254 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	SLC35E2B	P0CK96	405 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ACVR2A	P27037	513 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	MSX1	P28360	303 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	MSH2	P43246	934 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	NR0B1	P51843	470 aa	Known RBP	10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	TBL3	Q12788	808 aa	Known RBP	10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	CALCOCO2	Q13137	446 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	GXYLT1	Q4G148	440 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	FBXO48	Q5FWF7	155 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	PIGG	Q5H8A4	983 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	GRTP1	Q5TC63	336 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	MED27	Q6P2C8	311 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	CEP128	Q6ZU80	1094 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	C3orf62	Q6ZUJ4	267 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	TRIL	Q7L0X0	811 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ISCA2	Q86U28	154 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	FAM109A	Q8N4B1	249 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZNF321P	Q8N8H1	164 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	OR7G3	Q8NG95	312 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	STAG3L4	Q8TBR4	150 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZNF721	Q8TF20	911 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ESAM	Q96AP7	390 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	CMTM7	Q96FZ5	175 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	FBXL20	Q96IG2	436 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	OR8D2	Q9GZM6	311 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	LIN28A	Q9H9Z2	209 aa	Known RBP	10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	GRPEL1	Q9HAV7	217 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	SLC24A3	Q9HC58	644 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	SAYSD1	Q9NPB0	183 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	KCNJ16	Q9NPI9	418 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	MS4A12	Q9NXJ0	267 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	GRHL1	Q9NZI5	618 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	NUDT4	Q9NZJ9	180 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	COPS7A	Q9UBW8	275 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	RNF112	Q9ULX5	631 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	SPG11	Q96JI7	2443 aa		10.3	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZNF407	Q9C0G0	2248 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	FIGNL2	A6NMB9	653 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	FAM166B	A8MTA8	275 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508		K7EPI3	171 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	AQP7	O14520	342 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	CCNT2	O60583	730 aa	Known RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZNF354A	O60765	605 aa	Predicted RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	KERA	O60938	352 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	LDB3	O75112	727 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	S100B	P04271	92 aa	Predicted RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	HOXD4	P09016	255 aa	Predicted RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	COX7A2	P14406	83 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	CRABP2	P29373	138 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	SPR	P35270	261 aa	Predicted RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	PIK3CB	P42338	1070 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	STT3A	P46977	705 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	NUP107	P57740	925 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	GPX6	P59796	221 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	PLGLB1	Q02325	96 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	PMPCA	Q10713	525 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	AP5B1	Q2VPB7	878 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZNF750	Q32MQ0	723 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	ZNF791	Q3KP31	576 aa	Predicted RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	DEPDC1	Q5TB30	811 aa		10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	KHDRBS2	Q5VWX1	349 aa	Known RBP	10.29	□□□□□ -0.76
CBWD1-222	ENST00000613508	ADGRD1	Q6QNK2	874 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms