RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 CSF3RQ99062 836 aa11.52□□□□□ -0.56
CBWD1-221ENST00000613355 C1QTNF3Q9BXJ4 246 aa11.52□□□□□ -0.56
CBWD1-221ENST00000613355 BRF2Q9HAW0 419 aa11.52□□□□□ -0.56
CBWD1-221ENST00000613355 TMEM216Q9P0N5 145 aa11.52□□□□□ -0.56
CBWD1-221ENST00000613355 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.56
CBWD1-221ENST00000613355 SLC12A4Q9UP95 1085 aa11.52□□□□□ -0.56
CBWD1-221ENST00000613355 C17orf105B2RV13 164 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 HAX1O00165 279 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 LDB3O75112 727 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 TBX6O95947 436 aaPredicted RBP11.52□□□□□ -0.57
CBWD1-221ENST00000613355 FAM58BPP0C7Q3 252 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 HSD3B1P14060 373 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 IMPDH1P20839 514 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 HSD3B2P26439 372 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 GCAP28676 217 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 SLCO1A2P46721 670 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 UQCRFS1P47985 274 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 NEK2P51955 445 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 CASP6P55212 293 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 PKNOX1P55347 436 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
CBWD1-221ENST00000613355 TUBA3CQ13748 450 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 SGO1Q5FBB7 561 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 ZNF678Q5SXM1 525 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 CCNYL2Q5T2Q4 361 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 TUBA3EQ6PEY2 450 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 HSDL2Q6YN16 418 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 ZNF793Q6ZN11 406 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 GPRIN3Q6ZVF9 776 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 GPALPP1Q8IXQ4 340 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 RDH11Q8TC12 318 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 TRPC4APQ8TEL6 797 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 NCLNQ969V3 563 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 OR8D2Q9GZM6 311 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 DDX31Q9H8H2 851 aaKnown RBP11.52□□□□□ -0.57
CBWD1-221ENST00000613355 KLHL1Q9NR64 748 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 ANKRD10Q9NXR5 420 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 KCMF1Q9P0J7 381 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 ADAM29Q9UKF5 820 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 PSME2Q9UL46 239 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 ERVK-11Q9UQG0 969 aa11.52□□□□□ -0.57
CBWD1-221ENST00000613355 KLF13Q9Y2Y9 288 aaPredicted RBP11.52□□□□□ -0.57
CBWD1-221ENST00000613355 YARS2Q9Y2Z4 477 aaKnown RBP11.52□□□□□ -0.57
CBWD1-221ENST00000613355 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 TLDC2A0PJX2 215 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 KLRC4-KLRK1H3BQV0 150 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 ZNF500O60304 480 aaPredicted RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 ULK1O75385 1050 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 PIK3R1P27986 724 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 TPP2P29144 1249 aaPredicted RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 CD96P40200 585 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 STT3AP46977 705 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 HLCSP50747 726 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 SSR4P51571 173 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 MAPK12P53778 367 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 CDH13P55290 713 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 MLF1P58340 268 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 LCP2Q13094 533 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 TRAF3Q13114 568 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 MRPL49Q13405 166 aaKnown RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 MAPKAPK3Q16644 382 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 OR52E8Q6IFG1 317 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 SLC25A25Q6KCM7 469 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 SHISA5Q8N114 240 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 KIF2BQ8N4N8 673 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 CCNYL1Q8N7R7 359 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 LRRN4CLQ8ND94 238 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 NFAM1Q8NET5 270 aaPredicted RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 METTL6Q8TCB7 284 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 ASB15Q8WXK1 588 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 NR4A3Q92570 626 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 NSUN5Q96P11 429 aaKnown RBP11.51□□□□□ -0.57
CBWD1-221ENST00000613355 ZNF382Q96SR6 550 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 FAIM2Q9BWQ8 316 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 ZBTB26Q9HCK0 441 aa11.51□□□□□ -0.57
CBWD1-221ENST00000613355 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 GOLGA6L10A6NI86 522 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 A8MVJ9 347 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 PROM1O43490 865 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 DLX3O60479 287 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 ITGA10O75578 1167 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 SLC25A12O75746 678 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 OR4F21O95013 312 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 CBX6O95503 412 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 DDAH2O95865 285 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 TUBBP07437 444 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 SP1P08047 785 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 ALOX15P16050 662 aaPredicted RBP11.5□□□□□ -0.57
CBWD1-221ENST00000613355 HSD17B3P37058 310 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 HNRNPFP52597 415 aaKnown RBP11.5□□□□□ -0.57
CBWD1-221ENST00000613355 PRKAA2P54646 552 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 ALDH6A1Q02252 535 aaKnown RBP11.5□□□□□ -0.57
CBWD1-221ENST00000613355 FOLH1Q04609 750 aa11.5□□□□□ -0.57
CBWD1-221ENST00000613355 CSTF3Q12996 717 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms