RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SAGE2PA6NJ88 616 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 IDH3BO43837 385 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 SEMA7AO75326 666 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 C1orf105O95561 183 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 CYP2A6P11509 494 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 RNF144AP50876 292 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 C22orf42Q6IC83 251 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 TYW3Q6IPR3 259 aaKnown RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 MSANTD1Q6ZTZ1 278 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 C11orf24Q96F05 449 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 YME1L1Q96TA2 773 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 RSPO3Q9BXY4 272 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 BARHL1Q9BZE3 327 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 POLR2J3Q9H1A7 115 aaKnown RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 ANGPT4Q9Y264 503 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 WBP11Q9Y2W2 641 aaKnown RBP13.39□□□□□ -0.27
COL6A1-207ENST00000612273 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
COL6A1-207ENST00000612273 SLC35F4A4IF30 521 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 NPC1O15118 1278 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 DYRK3O43781 588 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SLC28A2O43868 658 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 GPR37L1O60883 481 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ITGA2P17301 1181 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TM4SF4P48230 202 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 IFITM2Q01629 132 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TAP2Q03519 686 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 MAP4K2Q12851 820 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SYPL1Q16563 259 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 CDKL4Q5MAI5 379 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 PLAG1Q6DJT9 500 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 RNF165Q6ZSG1 346 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ABI3BPQ7Z7G0 1075 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ADIPOR2Q86V24 386 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SLC39A11Q8N1S5 342 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 DENND6BQ8NEG7 585 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ARMC5Q96C12 935 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 MVB12BQ9H7P6 319 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ASAH2Q9NR71 780 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 PLSCR3Q9NRY6 295 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 UGT2A1Q9Y4X1 527 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 PCYT1BQ9Y5K3 369 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ATG2BQ96BY7 2078 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 PCM1Q15154 2024 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 H7BY64 318 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 LZTS3O60299 673 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ERAL1O75616 437 aaKnown RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 C1GALT1C1LP0DN25 315 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 GPC1P35052 558 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 OPRD1P41143 372 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 GPR1P46091 355 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 XCR1P46094 333 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 MAPK12P53778 367 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 PTPN5P54829 565 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 HOXC5Q00444 222 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF45Q02386 682 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 RUNX1T1Q06455 604 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SPHARQ15513 63 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 HENMT1Q5T8I9 393 aaKnown RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 FAM131AQ6UXB0 335 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TMPRSS11AQ6ZMR5 421 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 KIAA1958Q8N8K9 716 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 DOK4Q8TEW6 326 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TBC1D20Q96BZ9 403 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 C1GALT1C1Q96EU7 318 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 HOXD1Q9GZZ0 328 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SP140LQ9H930 580 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 CUEDC1Q9NWM3 386 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TAAR2Q9P1P5 351 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SEC14L3Q9UDX4 400 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 ANHXE9PGG2 379 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TAF4O00268 1085 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 POP7O75817 140 aaKnown RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 CXCL14O95715 111 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 CYP17A1P05093 508 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 C8orf89P0DMQ9 161 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 GABRB1P18505 474 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 XKP51811 444 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 CSNK2BP67870 215 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 DCST1Q5T197 706 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TMC5Q6UXY8 1006 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 B3GLCTQ6Y288 498 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 USP30Q70CQ3 517 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 NANOGNBQ7Z5D8 188 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 VN1R2Q8NFZ6 395 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 OR4D11Q8NGI4 311 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 OPALINQ96PE5 141 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SDHCQ99643 169 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TM9SF2Q99805 663 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 SMURF1Q9HCE7 757 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 HHATLQ9HCP6 504 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
COL6A1-207ENST00000612273 TMA7Q9Y2S6 64 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms