RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
LIG4-204ENST00000611712 TNS1Q9HBL0 1735 aaKnown RBP8.3□□□□□ -1.08
LIG4-204ENST00000611712 ISPDA4D126 451 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 URADA6NGE7 173 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PCDH17O14917 1159 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GABARAPO95166 117 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PAK4O96013 591 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 APODP05090 189 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 LAMP2P13473 410 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PRG2P13727 222 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SDC2P34741 201 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SLC6A12P48065 614 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GP2P55259 537 aaKnown RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 COX10Q12887 443 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PDGFRLQ15198 375 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 TBC1D25Q3MII6 688 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ZNF311Q5JNZ3 666 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 LIPKQ5VXJ0 399 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ZNF544Q6NX49 715 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SMARCD3Q6STE5 483 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 DPPA4Q7L190 304 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 CCDC116Q8IYX3 515 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ZNF740Q8NDX6 193 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 TTLQ8NG68 377 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 KCTD7Q96MP8 289 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ANKRA2Q9H9E1 313 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 TIGARQ9NQ88 270 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PRDM8Q9NQV8 689 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 MAT2BQ9NZL9 334 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 CALML5Q9NZT1 146 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 FAM170BA6NMN3 283 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GFYI3L273 518 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 FAAHO00519 579 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 DLGAP1O14490 977 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PCDHGA12O60330 932 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 FUCA1P04066 466 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 CDK1P06493 297 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SAGP10523 405 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 HPGDP15428 266 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 CD97P48960 835 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 STXBP1P61764 594 aaKnown RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 SLC35A2P78381 396 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 COX20Q5RI15 118 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 LHX8Q68G74 356 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SLCO4C1Q6ZQN7 724 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 LUZP2Q86TE4 346 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GJD3Q8N144 294 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 B3GNT7Q8NFL0 401 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PJA1Q8NG27 643 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 OR8J1Q8NGP2 316 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GGHQ92820 318 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 CAMK1GQ96NX5 476 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SACM1LQ9NTJ5 587 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 VNN3Q9NY84 501 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SEC14L4Q9UDX3 406 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 CORINQ9Y5Q5 1042 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SIP14410 1827 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 KMOO15229 486 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 VEGFDO43915 354 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SLCO2B1O94956 709 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PRKAR1AP10644 381 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 BMP4P12644 408 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SYN1P17600 705 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 EPHA2P29317 976 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SEC13P55735 322 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 MLLT1Q03111 559 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 ZNF181Q2M3W8 571 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 KHDRBS2Q5VWX1 349 aaKnown RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 KIAA1324Q6UXG2 1013 aaKnown RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 CCBE1Q6UXH8 406 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 NCCRP1Q6ZVX7 275 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 ENTHD1Q8IYW4 607 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 C12orf76Q8N812 135 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 RERGQ96A58 199 aaPredicted RBP8.29□□□□□ -1.08
LIG4-204ENST00000611712 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 OR51B4Q9Y5P0 310 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 OR10H2O60403 315 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GSTM3P21266 225 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 B4GALNT1Q00973 533 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SLC14A1Q13336 389 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 GAB1Q13480 694 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 FRMPD2BQ6IN97 320 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ADNP2Q6IQ32 1131 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 UNC5DQ6UXZ4 953 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 PEX5LQ8IYB4 626 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ECHDC3Q96DC8 303 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 DTD2Q96FN9 168 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 HRASLS5Q96KN8 279 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 OR51I1Q9H343 314 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 IL21Q9HBE4 155 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 ADAP2Q9NPF8 381 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 SNX7Q9UNH6 387 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 COLEC10Q9Y6Z7 277 aa8.29□□□□□ -1.08
LIG4-204ENST00000611712 LCTP09848 1927 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 CPSF4LA6NMK7 179 aaKnown RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 CHST10O43529 356 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 PSIP1O75475 530 aaKnown RBP8.28□□□□□ -1.08
LIG4-204ENST00000611712 TNFRSF21O75509 655 aa8.28□□□□□ -1.08
LIG4-204ENST00000611712 SLITRK5O94991 958 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms