RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 IPCEF1Q8WWN9 437 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-223ENST00000611614 RAD51AP1Q96B01 352 aa13.24□□□□□ -0.29
COPS7B-223ENST00000611614 BHLHE41Q9C0J9 482 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-223ENST00000611614 OR52A5Q9H2C5 316 aa13.24□□□□□ -0.29
COPS7B-223ENST00000611614 RIBC2Q9H4K1 309 aa13.24□□□□□ -0.29
COPS7B-223ENST00000611614 TM7SF3Q9NS93 570 aa13.24□□□□□ -0.29
COPS7B-223ENST00000611614 EXD2Q9NVH0 621 aa13.24□□□□□ -0.29
COPS7B-223ENST00000611614 SH3BP4Q9P0V3 963 aa13.24□□□□□ -0.29
COPS7B-223ENST00000611614 ZNF282Q9UDV7 671 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-223ENST00000611614 PCYT1BQ9Y5K3 369 aaPredicted RBP13.24□□□□□ -0.29
COPS7B-223ENST00000611614 PRAMEF26H0Y7S4 382 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 LATO43561 262 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 DIRAS1O95057 198 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 NUDT7P0C024 238 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 CCR5P51681 352 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 PPP5CP53041 499 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 ITGA1P56199 1179 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 TSTA3Q13630 321 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-223ENST00000611614 NFATC4Q14934 902 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 PAGE2BQ5JRK9 111 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 KIAA0895LQ68EN5 471 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 ENPP7Q6UWV6 458 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 B3GNT8Q7Z7M8 397 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 WDR92Q96MX6 357 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 GPR174Q9BXC1 333 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 REEP4Q9H6H4 257 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 TBC1D17Q9HA65 648 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 PDP1Q9P0J1 537 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-223ENST00000611614 ERVK-18Q9QC07 812 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 EXO1Q9UQ84 846 aaKnown RBP13.23□□□□□ -0.29
COPS7B-223ENST00000611614 SH2B3Q9UQQ2 575 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 SAMHD1Q9Y3Z3 626 aaKnown RBP13.23□□□□□ -0.29
COPS7B-223ENST00000611614 HS3ST3A1Q9Y663 406 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 SAGE2PA6NJ88 616 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 CLDN24A6NM45 220 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 RGS10O43665 173 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 DPM1O60762 260 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 APBB3O95704 486 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 FUT4P22083 530 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 ACADLP28330 430 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 PCGF2P35227 344 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 NUDT1P36639 197 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 CLK3P49761 638 aaKnown RBP13.23□□□□□ -0.29
COPS7B-223ENST00000611614 CLCNKAP51800 687 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 YPEL5P62699 121 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 IFITM3Q01628 133 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 DMPKQ09013 629 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 ZNF763Q0D2J5 394 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 GAB1Q13480 694 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 CLCA4Q14CN2 919 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 DCUN1D3Q8IWE4 304 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 EHD1Q9H4M9 534 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 C6orf106Q9H6K1 298 aaPredicted RBP13.23□□□□□ -0.29
COPS7B-223ENST00000611614 REEP1Q9H902 201 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 DMRT3Q9NQL9 472 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 ADPRHL2Q9NX46 363 aa13.23□□□□□ -0.29
COPS7B-223ENST00000611614 PRSS38A1L453 326 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TOR1BO14657 336 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 SUV39H1O43463 412 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 XPNPEP2O43895 674 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 SERPINB1P30740 379 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 CSNK2BP67870 215 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TUBA1BP68363 451 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 IL1RL1Q01638 556 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 SIM2Q14190 667 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-223ENST00000611614 GAS6Q14393 721 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 KRT33BQ14525 404 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 ZNF385BQ569K4 471 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.22□□□□□ -0.29
COPS7B-223ENST00000611614 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TUBA1AQ71U36 451 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 RD3Q7Z3Z2 195 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 ARMC8Q8IUR7 673 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 LRRC56Q8IYG6 542 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-223ENST00000611614 GOT1L1Q8NHS2 421 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-223ENST00000611614 RHOXF1Q8NHV9 184 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■□□□ 13.2
COPS7B-223ENST00000611614 FCGR1BQ92637 280 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 HPS1Q92902 700 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TPD52L3Q96J77 140 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 C7orf34Q96L11 122 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TPSD1Q9BZJ3 242 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 ZDHHC5Q9C0B5 715 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 KLHL25Q9H0H3 589 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 WSB2Q9NYS7 404 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-223ENST00000611614 KCNK6Q9Y257 313 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 NUP214P35658 2090 aaPredicted RBP13.22□□□□□ -0.29
COPS7B-223ENST00000611614 PIPSLA2A3N6 862 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 PDZK1P1A8MUH7 402 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 H0Y8X5 98 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TAF4O00268 1085 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 UGT2B10P36537 528 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 RABIFP47224 123 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TAP2Q03519 686 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 FZD5Q13467 585 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 TEAD4Q15561 434 aa13.22□□□□□ -0.29
COPS7B-223ENST00000611614 IQCCQ4KMZ1 466 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms