RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 NID1P14543 1247 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 IMPDH1P20839 514 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 NME2P22392 152 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 BSGP35613 385 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 NUP107P57740 925 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 FOLH1Q04609 750 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 MAP4K2Q12851 820 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TRIP13Q15645 432 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ELAVL1Q15717 326 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 NADK2Q4G0N4 442 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 PIGGQ5H8A4 983 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 FHL5Q5TD97 284 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 PRAMEF9Q5VWM5 478 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TMEM53Q6P2H8 277 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ZCCHC12Q6PEW1 402 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ZYG11AQ6WRX3 759 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 CPEB2Q7Z5Q1 589 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ERI1Q8IV48 349 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TNIP2Q8NFZ5 429 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 SLC26A7Q8TE54 656 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 CHTF18Q8WVB6 975 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ANKRD49Q8WVL7 239 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ITPKCQ96DU7 683 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 FAM118BQ9BPY3 351 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 CPNE5Q9HCH3 593 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ATP13A2Q9NQ11 1180 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 DMRT3Q9NQL9 472 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 GPN3Q9UHW5 284 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TLK1Q9UKI8 766 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 DYRK1BQ9Y463 629 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 PCDHGA11Q9Y5H2 935 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 KCNE2Q9Y6J6 123 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 SHANK1Q9Y566 2161 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 USP24Q9UPU5 2620 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 OR14I1A6ND48 311 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ADAM10O14672 748 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 HCRTR1O43613 425 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 HCRTR2O43614 444 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 BUD23O43709 281 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 PRMT3O60678 531 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 RSL1D1O76021 490 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TFAP2AP05549 437 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 FHP07954 510 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ERVK-10P10266 1014 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 MYL2P10916 166 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 DRD2P14416 443 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 PTX3P26022 381 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 KCNC1P48547 511 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 PDAP1Q13442 181 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TRIP10Q15642 601 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 FAM83EQ2M2I3 478 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 GRAMD1BQ3KR37 738 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 THOC7Q6I9Y2 204 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 FRMPD2BQ6IN97 320 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 UGT2A3Q6UWM9 527 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 C3orf62Q6ZUJ4 267 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 NANOGNBQ7Z5D8 188 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 RBM15BQ8NDT2 890 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 ZFP28Q8NHY6 868 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 HSPBAP1Q96EW2 488 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 LCORQ96JN0 433 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 KCNC2Q96PR1 638 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 HGH1Q9BTY7 390 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 MRPL1Q9BYD6 325 aaKnown RBP6.73□□□□□ -1.33
CBWD1-219ENST00000611457 OSGEPL1Q9H4B0 414 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 CAAP1Q9H8G2 361 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 TBC1D23Q9NUY8 699 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 SLC7A8Q9UHI5 535 aa6.73□□□□□ -1.33
CBWD1-219ENST00000611457 OR7A17O14581 309 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 MAGEB3O15480 346 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 SNX2O60749 519 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 SNNO75324 88 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-219ENST00000611457 MLYCDO95822 493 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 HIST1H2AGP0C0S8 130 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-219ENST00000611457 SLC35G6P0C7Q6 338 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 ALOX12P18054 663 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 IGFBP2P18065 325 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 CD22P20273 847 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 HIST1H2ADP20671 130 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 S100A1P23297 94 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 RPL10P27635 214 aaKnown RBP6.72□□□□□ -1.33
CBWD1-219ENST00000611457 PRDX6P30041 224 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 GRK3P35626 688 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 HERVK_113P63132 956 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 TNFRSF17Q02223 184 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 LRRC74AQ0VAA2 488 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 DEPDC1Q5TB30 811 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 LGSNQ5TDP6 509 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 Q6ZNX1 250 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 PRUNE1Q86TP1 453 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 TREML1Q86YW5 311 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 SLC15A3Q8IY34 581 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 MARVELD2Q8N4S9 558 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 CATSPER1Q8NEC5 780 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 TOR1AIP2Q8NFQ8 470 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 FAM110BQ8TC76 370 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 GIPC3Q8TF64 312 aa6.72□□□□□ -1.33
CBWD1-219ENST00000611457 RERGQ96A58 199 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-219ENST00000611457 TMEM41AQ96HV5 264 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms