RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ESR1P03372 595 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HIST1H2AGP0C0S8 130 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SMIM6P0DI80 62 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 CXCL2P19875 107 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HIST1H2ADP20671 130 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 GPX4P36969 197 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SRP9P49458 86 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HTR6P50406 440 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 P2RY4P51582 365 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 CTSCP53634 463 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 RAB8AP61006 207 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 NFKB2Q00653 900 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SEC23BQ15437 767 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 RFTN2Q52LD8 501 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 FAM72AQ5TYM5 149 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 PLAG1Q6DJT9 500 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HIST2H2AA3Q6FI13 130 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 FAM72DQ6L9T8 149 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SHFQ7M4L6 423 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 ANKRD46Q86W74 232 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 FAM72BQ86X60 149 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 MCATQ8IVS2 390 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 FBXO39Q8N4B4 442 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HASPINQ8TF76 798 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 ZNF707Q96C28 371 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HIST1H2AHQ96KK5 128 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 MAP3K3Q99759 626 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 HIST1H2AJQ99878 128 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 KATNB1Q9BVA0 655 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 ZNF624Q9P2J8 865 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 MYEF2Q9P2K5 600 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SIX4Q9UIU6 781 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SCP2D1Q9UJQ7 156 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SLC45A1Q9Y2W3 748 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 PRRG1O14668 218 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 GADD45GO95257 159 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 B3GALT4O96024 378 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 IL1AP01583 271 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SFTPCP11686 197 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 AKT1P31749 480 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SFNP31947 248 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 STARP49675 285 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 ACLYP53396 1101 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 FAM189BP81408 668 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 TAF1AQ15573 450 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 PLA1AQ53H76 456 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 TCTE1Q5JU00 501 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 ANKS6Q68DC2 871 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 IL27RAQ6UWB1 636 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 USP53Q70EK8 1073 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 TRIM69Q86WT6 500 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 NPWQ8N729 165 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 CA5BP1Q8WTZ4 195 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 CNOT9Q92600 299 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 RAD51AP1Q96B01 352 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 GAS2L1Q99501 681 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 TBL1YQ9BQ87 522 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SPRTNQ9H040 489 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SAP130Q9H0E3 1048 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 ANKRD19PQ9H560 264 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
CTCFL-218ENST00000608440 SAMD4AQ9UPU9 718 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 MRPL42Q9Y6G3 142 aaKnown RBP12.02□□□□□ -0.49
CTCFL-218ENST00000608440 MEIKINA0A087WXM9 373 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 C7orf66A4D0T2 115 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 OR51F1A6NGY5 319 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 G3V3Q6 166 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 WRBO00258 174 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 SDC3O75056 442 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 PRKRAO75569 313 aaKnown RBP12.01□□□□□ -0.49
CTCFL-218ENST00000608440 BEST1O76090 585 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 APEHP13798 732 aaKnown RBP12.01□□□□□ -0.49
CTCFL-218ENST00000608440 ATP5A1P25705 553 aaKnown RBP12.01□□□□□ -0.49
CTCFL-218ENST00000608440 ITGB7P26010 798 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 PTGFRP43088 359 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 NUBP1P53384 320 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 PPP3R1P63098 170 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 LCLAT1Q6UWP7 414 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-218ENST00000608440 KRTCAP2Q8N6L1 136 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 ARL6IP6Q8N6S5 226 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 CLDN22Q8N7P3 220 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 C7orf31Q8N865 590 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 BOLLQ8N9W6 283 aaKnown RBP12.01□□□□□ -0.49
CTCFL-218ENST00000608440 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 MDGA1Q8NFP4 955 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 OR1S1Q8NH92 325 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 C1GALT1C1Q96EU7 318 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 IL4I1Q96RQ9 567 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 PFDN5Q99471 154 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 PTPN18Q99952 460 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 NTMT1Q9BV86 223 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 MED9Q9NWA0 146 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 GPR31O00270 319 aa12.01□□□□□ -0.49
CTCFL-218ENST00000608440 GPR37O15354 613 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms