RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NEU4Q8WWR8 484 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADAMTS14Q8WXS8 1223 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCTD13Q8WZ19 329 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 DNASE1L2Q92874 299 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CHFRQ96EP1 664 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 NEIL1Q96FI4 390 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM176AQ96HP8 235 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 EXOC2Q96KP1 924 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 C10orf90Q96M02 699 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 Q96MT0 163 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RBP7Q96R05 134 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR2M2Q96R28 347 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR14A2Q96R54 314 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OR5M11Q96RB7 305 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 C12orf57Q99622 126 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 EPYCQ99645 322 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 MGLLQ99685 303 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 OMDQ99983 421 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GAL3ST1Q99999 423 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 IER2Q9BTL4 223 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM43Q9BTV4 400 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 APOL5Q9BWW9 433 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 JAM3Q9BX67 310 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 MRPL4Q9BYD3 311 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 BARHL1Q9BZE3 327 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TRIM8Q9BZR9 551 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 HAPLN2Q9GZV7 340 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PPIL3Q9H2H8 161 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 MIXL1Q9H2W2 232 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GHITMQ9H3K2 345 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TUBB1Q9H4B7 451 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TFB2MQ9H5Q4 396 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 BRD9Q9H8M2 597 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 IL1RL2Q9HB29 575 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ARNT2Q9HBZ2 717 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 FZD3Q9NPG1 666 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 EQTNQ9NQ60 294 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 BIN3Q9NQY0 253 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CATSPERZQ9NTU4 200 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 ABCB8Q9NUT2 735 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRMT7Q9NVM4 692 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 RDH8Q9NYR8 311 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 KCMF1Q9P0J7 381 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CPNE7Q9UBL6 633 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 CTSFQ9UBX1 484 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SRP68Q9UHB9 627 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 POLG2Q9UHN1 485 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PURGQ9UJV8 347 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TINAGQ9UJW2 476 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SCML1Q9UN30 329 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 GINS2Q9Y248 185 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 TMEM5Q9Y2B1 443 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SAMHD1Q9Y3Z3 626 aaKnown RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCDHA10Q9Y5I2 948 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 SNX8Q9Y5X2 465 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 U3KQV3 271 aa3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 COL5A2P05997 1499 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P50-201ENST00000605814 AHDC1Q5TGY3 1603 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GBF1Q92538 1859 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 COL11A2P13942 1736 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MEIKINA0A087WXM9 373 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GLYATL1P3A0A0U1RQE8 302 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 FAM240BA0A1B0GVZ2 78 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 A0A1W2PPL8 197 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SLC22A23A1A5C7 686 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCP4L1A6NKN8 68 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 H7C2Y5 167 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 AIPO00170 330 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CXCR6O00574 342 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 WNT9AO14904 365 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PCDH17O14917 1159 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PIP5K1BO14986 540 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GSTA4O15217 222 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 LYRM1O43325 122 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CHP2O43745 196 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 SUSD5O60279 629 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CDC14BO60729 498 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ITGA10O75578 1167 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 WDR47O94967 919 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 CCNDBP1O95273 360 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MPC2O95563 127 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 MLYCDO95822 493 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 DHFRP00374 187 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 S100A8P05109 93 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 IL6P05231 212 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PFKMP08237 780 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ADH4P08319 380 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ACSM4P0C7M7 580 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 UROSP10746 265 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 G6PDP11413 515 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ANXA3P12429 323 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PEPDP12955 493 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 TYRP14679 529 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 UGT2B7P16662 529 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 ITGALP20701 1170 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 GALP22466 123 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PRKACGP22612 351 aa3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 PSMA1P25786 263 aaKnown RBP3.88□□□□□ -1.79
HMGB1P50-201ENST00000605814 S100PP25815 95 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms