RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 C1orf109Q9NX04 203 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 WBP11Q9Y2W2 641 aaKnown RBP13.03□□□□□ -0.32
RNF40-212ENST00000602784 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 CLDN16Q9Y5I7 305 aa13.03□□□□□ -0.32
RNF40-212ENST00000602784 IGSF10Q6WRI0 2623 aa13.02□□□□□ -0.32
RNF40-212ENST00000602784 PCSK5Q92824 1860 aa13.02□□□□□ -0.32
RNF40-212ENST00000602784 NSG1A0A0A6YYJ2 146 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 ARGFXA6NJG6 315 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 PIP5K1BO14986 540 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 PCDH7O60245 1069 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 SEC22BO75396 215 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 CEACAM4O75871 244 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 MYO1DO94832 1006 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 LINC00032P0C843 101 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 NR2F6P10588 404 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 TIA1P31483 386 aaKnown RBP eCLIP13.02□□□□□ -0.33
RNF40-212ENST00000602784 OR4D2P58180 307 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 AP2B1P63010 937 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.33
RNF40-212ENST00000602784 IGLV3-21P80748 117 aaPredicted RBP13.02□□□□□ -0.33
RNF40-212ENST00000602784 SERTAD2Q14140 314 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 KIAA0040Q15053 153 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 PCOLCEQ15113 449 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 TERF2Q15554 542 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 LINC00303Q3SY05 128 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 SFT2D3Q587I9 215 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 HSP90B2PQ58FF3 399 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 XKR7Q5GH72 579 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 C18orf63Q68DL7 685 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 RIPOR1Q6ZS17 1223 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 LANCL3Q6ZV70 420 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 DDIASQ8IXT1 998 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.33
RNF40-212ENST00000602784 AGR3Q8TD06 166 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.33
RNF40-212ENST00000602784 ANKRD9Q96BM1 317 aaPredicted RBP13.02□□□□□ -0.33
RNF40-212ENST00000602784 WDR77Q9BQA1 342 aaPredicted RBP13.02□□□□□ -0.33
RNF40-212ENST00000602784 MESP1Q9BRJ9 268 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 LRTM1Q9HBL6 345 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 TMED5Q9Y3A6 229 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 PTGDR2Q9Y5Y4 395 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 ZFYVE26Q68DK2 2539 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 CHD6Q8TD26 2715 aa13.02□□□□□ -0.33
RNF40-212ENST00000602784 MED13Q9UHV7 2174 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 PIEZO2Q9H5I5 2752 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 GNG14A0A1W2PPG7 69 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 C1orf226A1L170 272 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 DYNC1I1O14576 645 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 KLHL41O60662 606 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 GPR75O95800 540 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 AIFM1O95831 613 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 ANXA4P09525 319 aaPredicted RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 SFTPCP11686 197 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 DRD2P14416 443 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 NR1D1P20393 614 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 POLE2P56282 527 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 OCRLQ01968 901 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 BTKQ06187 659 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 STX4Q12846 297 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 EXT1Q16394 746 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 CPZQ66K79 652 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 PLAG1Q6DJT9 500 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 OR52E8Q6IFG1 317 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 NOXRED1Q6NXP6 359 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 OR2T11Q8NH01 316 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 FCRL1Q96LA6 429 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 PPP3R2Q96LZ3 170 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 UBL7Q96S82 380 aaPredicted RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 LPAR4Q99677 370 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 ARHGAP9Q9BRR9 750 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 FAIM2Q9BWQ8 316 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 TRIM55Q9BYV6 548 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 ZNF160Q9HCG1 818 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 INTS9Q9NV88 658 aaKnown RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 TEX10Q9NXF1 929 aaPredicted RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 VTI1BQ9UEU0 232 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
RNF40-212ENST00000602784 PCDHA9Q9Y5H5 950 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 SCN2AQ99250 2005 aa13.01□□□□□ -0.33
RNF40-212ENST00000602784 SLCO1B7G3V0H7 640 aa13□□□□□ -0.33
RNF40-212ENST00000602784 MKRN2OSH3BPM6 223 aa13□□□□□ -0.33
RNF40-212ENST00000602784 TGFBR3LH3BV60 316 aa13□□□□□ -0.33
RNF40-212ENST00000602784 SERPINA7P05543 415 aa13□□□□□ -0.33
RNF40-212ENST00000602784 CCL11P51671 97 aa13□□□□□ -0.33
RNF40-212ENST00000602784 EEF1A2Q05639 463 aaKnown RBP13□□□□□ -0.33
RNF40-212ENST00000602784 NR6A1Q15406 480 aa13□□□□□ -0.33
RNF40-212ENST00000602784 ELAVL1Q15717 326 aaKnown RBP13□□□□□ -0.33
RNF40-212ENST00000602784 SMU1Q2TAY7 513 aa13□□□□□ -0.33
RNF40-212ENST00000602784 JMJD6Q6NYC1 403 aaPredicted RBP13□□□□□ -0.33
RNF40-212ENST00000602784 PAPD4Q6PIY7 484 aaKnown RBP13□□□□□ -0.33
RNF40-212ENST00000602784 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
RNF40-212ENST00000602784 GALNT16Q8N428 558 aa13□□□□□ -0.33
RNF40-212ENST00000602784 PUM2Q8TB72 1066 aaKnown RBP eCLIP13□□□□□ -0.33
RNF40-212ENST00000602784 DNAJB14Q8TBM8 379 aa13□□□□□ -0.33
RNF40-212ENST00000602784 M1APQ8TC57 530 aa13□□□□□ -0.33
RNF40-212ENST00000602784 C16orf78Q8WTQ4 265 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms