RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 KRT75O95678 551 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 FESP07332 822 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NTSP30990 170 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SOX11P35716 441 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 TNFRSF17Q02223 184 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SLC14A1Q13336 389 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 LPAL2Q16609 132 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 TCTE1Q5JU00 501 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 CPZQ66K79 652 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NIPAL1Q6NVV3 410 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 USP53Q70EK8 1073 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 EID2Q8N6I1 236 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 ZFP28Q8NHY6 868 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NSMCE2Q96MF7 247 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 BBS4Q96RK4 519 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 TRIM4Q9C037 500 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 RAD21L1Q9H4I0 556 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 ANKHQ9HCJ1 492 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 GIMAP4Q9NUV9 329 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 NAALAD2Q9Y3Q0 740 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 AP4S1Q9Y587 144 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 SPACA6W5XKT8 324 aa16.69■□□□□ 0.26
SHKBP1-224ENST00000600718 LY6G6EA0A0G2JKS1 128 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 MYO1GB0I1T2 1018 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 PRKRAO75569 313 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 UMPSP11172 480 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ATP6V1C1P21283 382 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 POLE2P56282 527 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 HSD11B2P80365 405 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 RGNQ15493 299 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CYP51A1Q16850 503 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 MTX3Q5HYI7 312 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 IRAK1BP1Q5VVH5 260 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 FAM180BQ6P0A1 224 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ERICH5Q6P6B1 374 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ZNF551Q7Z340 670 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 KMT5CQ86Y97 462 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 C10orf111Q8N326 155 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 PSMA8Q8TAA3 256 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 KLHL6Q8WZ60 621 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 GMEB2Q9UKD1 530 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ENTPD4Q9Y227 616 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 PCDHGA5Q9Y5G8 931 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 U3KQA8 63 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CPED1A4D0V7 1026 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 EME2A4GXA9 379 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 WASHC1A8K0Z3 465 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CXCR6O00574 342 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ERAL1O75616 437 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 KCNK5O95279 499 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 C1QCP02747 245 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 NTRK1P04629 796 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 GPIP06744 558 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CTSBP07858 339 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CHI3L1P36222 383 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ARL4DP49703 201 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 SESN3P58005 492 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 SKP1P63208 163 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 GARNL3Q5VVW2 1013 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 GUSBP11Q6P575 273 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 PRSS42Q7Z5A4 293 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 PDSS2Q86YH6 399 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CLEC4FQ8N1N0 589 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 OR52N2Q8NGI0 321 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 PNPT1Q8TCS8 783 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 NAT6Q93015 286 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 AMDHD1Q96NU7 426 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 EFHD1Q9BUP0 239 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 GLIPR2Q9H4G4 154 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 RPF2Q9H7B2 306 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CXorf36Q9H7Y0 433 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CCM2LQ9NUG4 571 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 C6orf203Q9P0P8 240 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 ZNF780BQ9Y6R6 833 aa16.68■□□□□ 0.26
SHKBP1-224ENST00000600718 CROCCQ5TZA2 2017 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 TCRBV5S2A0A599 114 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 ACADSP16219 412 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 CSNK2A2P19784 350 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 CSF2RBP32927 897 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 SOAT1P35610 550 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 PEX19P40855 299 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 PTDSS1P48651 473 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 VAC14Q08AM6 782 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 SPIDRQ14159 915 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 RNF111Q6ZNA4 994 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 PRSS41Q7RTY9 318 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 SAMD14Q8IZD0 417 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 OR2I1PQ8NGU4 316 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 FIG4Q92562 907 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 POP5Q969H6 163 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 GTPBP2Q9BX10 602 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 EPS8L2Q9H6S3 715 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 ENAMQ9NRM1 1142 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 SNX8Q9Y5X2 465 aa16.67■□□□□ 0.26
SHKBP1-224ENST00000600718 DHRS12A0PJE2 317 aa16.66■□□□□ 0.26
SHKBP1-224ENST00000600718 DNAJB6O75190 326 aa16.66■□□□□ 0.26
SHKBP1-224ENST00000600718 PSMA4P25789 261 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-224ENST00000600718 MPIP34949 423 aa16.66■□□□□ 0.26
SHKBP1-224ENST00000600718 MPLP40238 635 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms