RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SERTM1A2A2V5 107 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 ESRRBO95718 433 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 PDYNP01213 254 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 KRT6AP02538 564 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 KRT6BP04259 564 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 CPA3P15088 417 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 TSPAN8P19075 237 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 CPN2P22792 545 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 ELAVL4P26378 380 aaKnown RBP15.13■□□□□ 0.01
LSM4-206ENST00000600289 KRT6CP48668 564 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 CSTF3Q12996 717 aaKnown RBP15.13■□□□□ 0.01
LSM4-206ENST00000600289 SLC13A2Q13183 592 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 BIKQ13323 160 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 SERTAD2Q14140 314 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 ELAVL1Q15717 326 aaKnown RBP15.13■□□□□ 0.01
LSM4-206ENST00000600289 B3GNTL1Q67FW5 361 aaPredicted RBP15.13■□□□□ 0.01
LSM4-206ENST00000600289 FRMD7Q6ZUT3 714 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 GPR180Q86V85 440 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 ARMC10Q8N2F6 343 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 METTL4Q8N3J2 472 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 SIRT6Q8N6T7 355 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 AGAP11Q8TF27 550 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 HAS2Q92819 552 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 ZNF354BQ96LW1 612 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 PHF12Q96QT6 1004 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 AHSPQ9NZD4 102 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 SENP1Q9P0U3 644 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 PTGFRNQ9P2B2 879 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 VTI1BQ9UEU0 232 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 PLLPQ9Y342 182 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 SHANK1Q9Y566 2161 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 ASB4Q9Y574 426 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 F8P00451 2351 aa15.13■□□□□ 0.01
LSM4-206ENST00000600289 PROM1O43490 865 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 EEDO75530 441 aaKnown RBP15.12■□□□□ 0.01
LSM4-206ENST00000600289 PPP2R1BP30154 601 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 BUD31P41223 144 aaPredicted RBP15.12■□□□□ 0.01
LSM4-206ENST00000600289 HNRNPH2P55795 449 aaKnown RBP15.12■□□□□ 0.01
LSM4-206ENST00000600289 PLEKHN1Q494U1 663 aaPredicted RBP15.12■□□□□ 0.01
LSM4-206ENST00000600289 LIPMQ5VYY2 423 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 LINC00696Q6ZRV3 163 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 PAGE2Q7Z2X7 111 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 CDYL2Q8N8U2 506 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 B3GNT7Q8NFL0 401 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 SELENOMQ8WWX9 145 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 TANKQ92844 425 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 MFRPQ9BY79 579 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 ILKAPQ9H0C8 392 aaPredicted RBP15.12■□□□□ 0.01
LSM4-206ENST00000600289 KCNK13Q9HB14 408 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 SLAMF7Q9NQ25 335 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 NMRK1Q9NWW6 199 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 FBXW2Q9UKT8 454 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 PCDHGA10Q9Y5H3 936 aa15.12■□□□□ 0.01
LSM4-206ENST00000600289 DYTNA2CJ06 578 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 CCDC151A5D8V7 595 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 MANBAO00462 879 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TMPRSS11DO60235 418 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 FAM58BPP0C7Q3 252 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TLX1P31314 330 aaPredicted RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 UQCRFS1P47985 274 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TNFSF10P50591 281 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 GPR143P51810 404 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TAS2R50P59544 299 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 ZNF844Q08AG5 666 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TBL3Q12788 808 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 STX4Q12846 297 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 PCLAFQ15004 111 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TLR1Q15399 786 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 MEP1AQ16819 746 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 ABHD17BQ5VST6 288 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 CYP20A1Q6UW02 462 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 CROCCP2Q86T23 111 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 CUZD1Q86UP6 607 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 SRRM1Q8IYB3 904 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 IQCKQ8N0W5 287 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TMEM132CQ8N3T6 1108 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 SLC5A8Q8N695 610 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 GBP7Q8N8V2 638 aaPredicted RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 APCDD1LQ8NCL9 501 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 OR14A16Q8NHC5 309 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 METTL6Q8TCB7 284 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 ANKRD9Q96BM1 317 aaPredicted RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 MTFMTQ96DP5 389 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 RPF2Q9H7B2 306 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 FARSBQ9NSD9 589 aaKnown RBP15.11■□□□□ 0.01
LSM4-206ENST00000600289 ATG4BQ9Y4P1 393 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 CSAG2Q9Y5P2 127 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 PDZD2O15018 2839 aa15.11■□□□□ 0.01
LSM4-206ENST00000600289 TTLL8A6PVC2 850 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 UBFD1O14562 309 aaKnown RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 ULK1O75385 1050 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 MYO1DO94832 1006 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 AGFG2O95081 481 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 TPP2P29144 1249 aaPredicted RBP15.1■□□□□ 0.01
LSM4-206ENST00000600289 HMOX2P30519 316 aa15.1■□□□□ 0.01
LSM4-206ENST00000600289 NAGLUP54802 743 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms