RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 STX4Q12846 297 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 CSTF3Q12996 717 aaKnown RBP14.23□□□□□ -0.13
LIG1-219ENST00000600055 MFAP5Q13361 173 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 CRB2Q5IJ48 1285 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 CCNYL2Q5T2Q4 361 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 SLC6A19Q695T7 634 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 CLEC6AQ6EIG7 209 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 JMJD6Q6NYC1 403 aaPredicted RBP14.23□□□□□ -0.13
LIG1-219ENST00000600055 IGFL2Q6UWQ7 119 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 IGFL3Q6UXB1 125 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 C1orf52Q8N6N3 182 aaKnown RBP14.23□□□□□ -0.13
LIG1-219ENST00000600055 CNDP1Q96KN2 507 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 EPN3Q9H201 632 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 RPF2Q9H7B2 306 aaKnown RBP14.23□□□□□ -0.13
LIG1-219ENST00000600055 KCNK13Q9HB14 408 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 MMP25Q9NPA2 562 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 TEX10Q9NXF1 929 aaPredicted RBP14.23□□□□□ -0.13
LIG1-219ENST00000600055 MS4A12Q9NXJ0 267 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 PLA2G3Q9NZ20 509 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 VPS29Q9UBQ0 182 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 ANAPC2Q9UJX6 822 aa14.23□□□□□ -0.13
LIG1-219ENST00000600055 PYCARD-AS1I3L0S3 204 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 MAN1A2O60476 641 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 CRCPO75575 148 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 F10P00742 488 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 IFNA16P05015 189 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 CHRNGP07510 517 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 BPGMP07738 259 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 UQCRHP07919 91 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 HSD3B1P14060 373 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 HSD3B2P26439 372 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 TLX1P31314 330 aaPredicted RBP14.22□□□□□ -0.13
LIG1-219ENST00000600055 CASRP41180 1078 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 BUD31P41223 144 aaPredicted RBP14.22□□□□□ -0.13
LIG1-219ENST00000600055 MPP2Q14168 576 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 PLEKHN1Q494U1 663 aaPredicted RBP14.22□□□□□ -0.13
LIG1-219ENST00000600055 ATG14Q6ZNE5 492 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 PAGE2Q7Z2X7 111 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 CUZD1Q86UP6 607 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 ZADH2Q8N4Q0 377 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 Q8NA96 180 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 ELP5Q8TE02 316 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 CHTF18Q8WVB6 975 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 PGM2Q96G03 612 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 APIPQ96GX9 242 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 PKNOX2Q96KN3 472 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 LMF1Q96S06 567 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 NPAS2Q99743 824 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 TRIM4Q9C037 500 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 EPS8L2Q9H6S3 715 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 ADAP2Q9NPF8 381 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 ADAM29Q9UKF5 820 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 FIS1Q9Y3D6 152 aa14.22□□□□□ -0.13
LIG1-219ENST00000600055 WDR91A4D1P6 747 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 BLACEA4D250 179 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 PGRMC2O15173 223 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 NR2F6P10588 404 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 PLA2G2AP14555 144 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 ARRB2P32121 409 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 MAPK12P53778 367 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 AP2B1P63010 937 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 RAE1P78406 368 aaKnown RBP14.21□□□□□ -0.13
LIG1-219ENST00000600055 IGLV3-21P80748 117 aaPredicted RBP14.21□□□□□ -0.13
LIG1-219ENST00000600055 FOLH1Q04609 750 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 BTKQ06187 659 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 ASPHQ12797 758 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 CASP8Q14790 479 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 H3F3CQ6NXT2 135 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 CROCCP2Q86T23 111 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 HPS6Q86YV9 775 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 CRLF3Q8IUI8 442 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 MMP21Q8N119 569 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 GBP7Q8N8V2 638 aaPredicted RBP14.21□□□□□ -0.13
LIG1-219ENST00000600055 CATSPER1Q8NEC5 780 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 DOK4Q8TEW6 326 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 PTPMT1Q8WUK0 201 aaPredicted RBP14.21□□□□□ -0.13
LIG1-219ENST00000600055 TM9SF4Q92544 642 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 TANKQ92844 425 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 PPWD1Q96BP3 646 aaKnown RBP14.21□□□□□ -0.13
LIG1-219ENST00000600055 SSU72Q9NP77 194 aaKnown RBP14.21□□□□□ -0.13
LIG1-219ENST00000600055 KCNK9Q9NPC2 374 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 NMRK1Q9NWW6 199 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 VTI1BQ9UEU0 232 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 PTGDR2Q9Y5Y4 395 aa14.21□□□□□ -0.13
LIG1-219ENST00000600055 A0A1W2PS29 197 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 SERTM1A2A2V5 107 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 TMEM233B4DJY2 109 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 H3BQF6 201 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 NPHS1O60500 1241 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 SORBS2O94875 1100 aaKnown RBP14.2□□□□□ -0.14
LIG1-219ENST00000600055 WDPCPO95876 746 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 MYZAPP0CAP1 466 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 UROSP10746 265 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 SERPINB4P48594 390 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 GPR143P51810 404 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 MLLT10P55197 1068 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 ZNF33BQ06732 778 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 SERTAD2Q14140 314 aa14.2□□□□□ -0.14
LIG1-219ENST00000600055 ELAVL1Q15717 326 aaKnown RBP14.2□□□□□ -0.14
LIG1-219ENST00000600055 ARL13AQ5H913 290 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms