RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 DEKP35659 375 aaKnown RBP26.35■■□□□ 1.81
SSBP4-206ENST00000599699 SERTAD2Q14140 314 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 TERF2Q15554 542 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 MEP1AQ16819 746 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 KRT71Q3SY84 523 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 TCHHL1Q5QJ38 904 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-206ENST00000599699 C18orf63Q68DL7 685 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 H3F3CQ6NXT2 135 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 CNTRLQ7Z7A1 2325 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 CRLF3Q8IUI8 442 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 CISD2Q8N5K1 135 aaKnown RBP26.35■■□□□ 1.81
SSBP4-206ENST00000599699 NFAM1Q8NET5 270 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-206ENST00000599699 B3GNT7Q8NFL0 401 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 OR1N1Q8NGS0 311 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 HAS2Q92819 552 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 BRF2Q9HAW0 419 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 MID1IP1Q9NPA3 183 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 OXSMQ9NWU1 459 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 CLCA3PQ9Y6N3 262 aa26.35■■□□□ 1.81
SSBP4-206ENST00000599699 CCDC151A5D8V7 595 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 ULK1O75385 1050 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 SPAG7O75391 227 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 ENO1P06733 434 aaKnown RBP26.34■■□□□ 1.81
SSBP4-206ENST00000599699 KLK1P06870 262 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 DNAJB13P59910 316 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 NAA20P61599 178 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 ELAVL1Q15717 326 aaKnown RBP26.34■■□□□ 1.81
SSBP4-206ENST00000599699 ATCAYQ86WG3 371 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 OR4N5Q8IXE1 308 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 BEST3Q8N1M1 668 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 TMEM132CQ8N3T6 1108 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 BANPQ8N9N5 519 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 TANKQ92844 425 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 MIB2Q96AX9 1013 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 SMC6Q96SB8 1091 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 TMEM109Q9BVC6 243 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 DEFB126Q9BYW3 111 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 WDR41Q9HAD4 459 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 MKS1Q9NXB0 559 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 PLLPQ9Y342 182 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 ASB4Q9Y574 426 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 PCDHGA10Q9Y5H3 936 aa26.34■■□□□ 1.81
SSBP4-206ENST00000599699 PROM1O43490 865 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 PRKRAO75569 313 aaKnown RBP26.33■■□□□ 1.81
SSBP4-206ENST00000599699 ESRRBO95718 433 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 NR2F6P10588 404 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 KCNC4Q03721 635 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 CCNYL2Q5T2Q4 361 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 MRM1Q6IN84 353 aaKnown RBP26.33■■□□□ 1.81
SSBP4-206ENST00000599699 METTL4Q8N3J2 472 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 SUN3Q8TAQ9 357 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 AGAP11Q8TF27 550 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 ANKRD9Q96BM1 317 aaPredicted RBP26.33■■□□□ 1.81
SSBP4-206ENST00000599699 RNF32Q9H0A6 362 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 CDCP1Q9H5V8 836 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 VTI1BQ9UEU0 232 aa26.33■■□□□ 1.81
SSBP4-206ENST00000599699 TRAV17A0A0B4J275 112 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 TRBV11-1A0A0K0K1C0 115 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 A0A1W2PR48 441 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 OR5H15A6NDH6 313 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 FGF17O60258 216 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 CRCPO75575 148 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 TNFSF10P50591 281 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 CLCN2P51788 898 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 LIPMQ5VYY2 423 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 FRMD7Q6ZUT3 714 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 COMMD6Q7Z4G1 85 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 RPS19BP1Q86WX3 136 aaKnown RBP26.32■■□□□ 1.8
SSBP4-206ENST00000599699 C10orf107Q8IVU9 208 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 C7orf57Q8NEG2 295 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 DAZLQ92904 295 aaKnown RBP26.32■■□□□ 1.8
SSBP4-206ENST00000599699 NCLNQ969V3 563 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 SNRNP40Q96DI7 357 aaKnown RBP26.32■■□□□ 1.8
SSBP4-206ENST00000599699 VMP1Q96GC9 406 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 KCNA7Q96RP8 456 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 VPS29Q9UBQ0 182 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 ADAM29Q9UKF5 820 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 TIMM22Q9Y584 194 aa26.32■■□□□ 1.8
SSBP4-206ENST00000599699 COPG1Q9Y678 874 aaKnown RBP26.32■■□□□ 1.8
SSBP4-206ENST00000599699 PRRC2CQ9Y520 2896 aaKnown RBP26.32■■□□□ 1.8
SSBP4-206ENST00000599699 NBASA2RRP1 2371 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 GLOD5A6NK44 160 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 MAN1A2O60476 641 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 VPS4BO75351 444 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 HSD3B1P14060 373 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 COX7A2P14406 83 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 HSD3B2P26439 372 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 ST13P50502 369 aaKnown RBP26.31■■□□□ 1.8
SSBP4-206ENST00000599699 FOLH1Q04609 750 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 ZNF844Q08AG5 666 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 CSTF3Q12996 717 aaKnown RBP26.31■■□□□ 1.8
SSBP4-206ENST00000599699 OR14A16Q8NHC5 309 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 C19orf60Q96EN9 201 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 DGAT2Q96PD7 388 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 FAM111AQ96PZ2 611 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 NPAS2Q99743 824 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 VPS4AQ9UN37 437 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 BAHCC1Q9P281 2608 aa26.31■■□□□ 1.8
SSBP4-206ENST00000599699 C17orf105B2RV13 164 aa26.3■■□□□ 1.8
SSBP4-206ENST00000599699 UBFD1O14562 309 aaKnown RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms