RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 GALNT18Q6P9A2 607 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 MTDHQ86UE4 582 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 SLC34A3Q8N130 599 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 MIER2Q8N344 545 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 ZCCHC7Q8N3Z6 543 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 TEX19Q8NA77 164 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 FCRL1Q96LA6 429 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 C10orf90Q96M02 699 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 TEFMQ96QE5 360 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 ZBTB18Q99592 522 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 SORBS1Q9BX66 1292 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 AICDAQ9GZX7 198 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 CUTCQ9NTM9 273 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 TXLNGQ9NUQ3 528 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 OCIAD1Q9NX40 245 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 LYARQ9NX58 379 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 SLC39A1Q9NY26 324 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 NDOR1Q9UHB4 597 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 COPG1Q9Y678 874 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 SPACA6W5XKT8 324 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 A0A0A6YYD5 115 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 B4E171 279 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 C4orf51C9J302 202 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 ZNF749O43361 778 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 GALR3O60755 368 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 EEDO75530 441 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 SCRG1O75711 98 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 SCELO95171 688 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 GBAP04062 536 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 CTSBP07858 339 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 HBQ1P09105 142 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 G6PDP11413 515 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 TPP2P29144 1249 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 HPCAL1P37235 193 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 TSPAN7P41732 249 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 RAB15P59190 212 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 TRA2BP62995 288 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 RAE1P78406 368 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 MC2RQ01718 297 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 FAM53BQ14153 422 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 PDCD4Q53EL6 469 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 CEACAM20Q6UY09 585 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 IKBIPQ70UQ0 350 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 TIPARPQ7Z3E1 657 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 UBE3DQ7Z6J8 389 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 TMEM132CQ8N3T6 1108 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 ACOT4Q8N9L9 421 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 CPT1CQ8TCG5 803 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 STARD8Q92502 1023 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 TSSK3Q96PN8 268 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 FAIM2Q9BWQ8 316 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 ZNF717Q9BY31 904 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 DPY30Q9C005 99 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 BRINP2Q9C0B6 783 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 DDX31Q9H8H2 851 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 LHX9Q9NQ69 397 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 SAR1AQ9NR31 198 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 ENAMQ9NRM1 1142 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 PHF11Q9UIL8 331 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 ERRFI1Q9UJM3 462 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 CDC14AQ9UNH5 594 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 MAPRE3Q9UPY8 281 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 DLGAP4Q9Y2H0 992 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 MRPS2Q9Y399 296 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 NAALAD2Q9Y3Q0 740 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 CAPN7Q9Y6W3 813 aa11.38□□□□□ -0.59
SHKBP1-213ENST00000597325 MDC1Q14676 2089 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 A0A0A6YYC8 382 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 A0A1B0GX78 115 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 ZNF860A6NHJ4 632 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 ZNF891A8MT65 544 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 H3BMH7 237 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 I3L1I5 382 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 PSMD12O00232 456 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 DSCR3O14972 297 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SLC22A2O15244 555 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 NKX2-8O15522 239 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 RDH16O75452 317 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 NSA2O95478 260 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 B3GALT4O96024 378 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 FAM58BPP0C7Q3 252 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SMIM10L1P0DMW3 83 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 FGF5P12034 268 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 DDX5P17844 614 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 PRPS1L1P21108 318 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 RPL3P39023 403 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 MAPK10P53779 464 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 CLNS1AP54105 237 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 NME5P56597 212 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SLAMF1Q13291 335 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 PTGR1Q14914 329 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 MAPRE2Q15555 327 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 EIF2S3LQ2VIR3 472 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 DCAF12Q5T6F0 453 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms