RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 TRMT5Q32P41 509 aaKnown RBP13.83□□□□□ -0.2
VRK3-212ENST00000596814 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 HACD2Q6Y1H2 254 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 DHDDSQ86SQ9 333 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 GTF2H4Q92759 462 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 CIDECQ96AQ7 238 aaPredicted RBP13.83□□□□□ -0.2
VRK3-212ENST00000596814 KLHL29Q96CT2 875 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 CTRCQ99895 268 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 RPF2Q9H7B2 306 aaKnown RBP13.83□□□□□ -0.2
VRK3-212ENST00000596814 GID8Q9NWU2 228 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 TAS2R7Q9NYW3 318 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 MAP10Q9P2G4 905 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 MAN2B2Q9Y2E5 1009 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 TMEM184BQ9Y519 407 aaPredicted RBP13.83□□□□□ -0.2
VRK3-212ENST00000596814 PCDHB3Q9Y5E6 796 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 MAU2Q9Y6X3 613 aa13.83□□□□□ -0.2
VRK3-212ENST00000596814 PRSS51A0A1B0GVH4 220 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 CYR61O00622 381 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SCN2BO60939 215 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 KCNH1O95259 989 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 HBQ1P09105 142 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 EFNA1P20827 205 aaPredicted RBP13.82□□□□□ -0.2
VRK3-212ENST00000596814 FBLP22087 321 aaKnown RBP13.82□□□□□ -0.2
VRK3-212ENST00000596814 OR1D4P47884 311 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SIM1P81133 766 aaPredicted RBP13.82□□□□□ -0.2
VRK3-212ENST00000596814 LRRC74AQ0VAA2 488 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 DSG2Q14126 1118 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SYT16Q17RD7 645 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
VRK3-212ENST00000596814 C1orf189Q5VU69 101 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
VRK3-212ENST00000596814 RAB11FIP2Q7L804 512 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 CLECL1Q8IZS7 167 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 DNAJB14Q8TBM8 379 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 CLIP3Q96DZ5 547 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 PEX11GQ96HA9 241 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 CCDC115Q96NT0 180 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 RBCK1Q9BYM8 510 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 IL1RL2Q9HB29 575 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SERHLQ9NQF3 203 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SLC35C2Q9NQQ7 365 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 GIMAP4Q9NUV9 329 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SLC39A1Q9NY26 324 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 RAPGEFL1Q9UHV5 662 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 CES1P1Q9UKY3 287 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 PSME2Q9UL46 239 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 ENTPD4Q9Y227 616 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 SCN2AQ99250 2005 aa13.82□□□□□ -0.2
VRK3-212ENST00000596814 RFXANKO14593 260 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 TM4SF5O14894 197 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ERAL1O75616 437 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 NPPAP01160 153 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 NTSP30990 170 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 RAB15P59190 212 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ARHGAP40Q5TG30 622 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 FAM180BQ6P0A1 224 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ASRGL1Q7L266 308 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 DEFB107AQ8IZN7 70 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 PGAM4Q8N0Y7 254 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 SHISA5Q8N114 240 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 KIF2BQ8N4N8 673 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 OR51Q1Q8NH59 317 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 COL26A1Q96A83 441 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 LRRC58Q96CX6 371 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 RNF31Q96EP0 1072 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 PANX1Q96RD7 426 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 INPP5KQ9BT40 448 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ZNF304Q9HCX3 659 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 CROTQ9UKG9 612 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 MAP4K5Q9Y4K4 846 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 CCDC187A0A096LP49 1063 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 A0A096LPI6 279 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 A0A1W2PRB8 838 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 BLACEA4D250 179 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 WASHC1A8K0Z3 465 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 FAM227AF5H4B4 570 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 FXYD1O00168 92 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 CPNE3O75131 537 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 ERN1O75460 977 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 CPSF4O95639 269 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 CEACAM1P13688 526 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ITIH1P19827 911 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 XCR1P46094 333 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 HNRNPFP52597 415 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 PCBP4P57723 403 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 EIF3IQ13347 325 aaKnown RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 CEACAM20Q6UY09 585 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 TMEM52Q8NDY8 209 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 OR4A15Q8NGL6 344 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 DNAJB8Q8NHS0 232 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 TBC1D20Q96BZ9 403 aa13.81□□□□□ -0.2
VRK3-212ENST00000596814 ZBED6CLQ96FA7 236 aaPredicted RBP13.81□□□□□ -0.2
VRK3-212ENST00000596814 GBP5Q96PP8 586 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms