RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ST13P50502 369 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 HSD17B7P56937 341 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 HMGCS1Q01581 520 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 CSTF3Q12996 717 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 C10orf62Q5T681 223 aaPredicted RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 VWA5B1Q5TIE3 1220 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 AGAP7PQ5VUJ5 663 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 B3GNTL1Q67FW5 361 aaPredicted RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 PRICKLE2Q7Z3G6 844 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 CUZD1Q86UP6 607 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 METTL4Q8N3J2 472 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 ZCCHC7Q8N3Z6 543 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 C1orf52Q8N6N3 182 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 MGARPQ8TDB4 240 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 UCN3Q969E3 161 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 IMMP1LQ96LU5 166 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 AGAP4Q96P64 663 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 WDR77Q9BQA1 342 aaPredicted RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 ZNF717Q9BY31 904 aaPredicted RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 ALOXE3Q9BYJ1 711 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 RPF2Q9H7B2 306 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 DDX31Q9H8H2 851 aaKnown RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 WDR41Q9HAD4 459 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 BRF2Q9HAW0 419 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 TMBIM4Q9HC24 238 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 ZBTB20Q9HC78 741 aaPredicted RBP10.39□□□□□ -0.75
LIG1-211ENST00000596457 TNFRSF12AQ9NP84 129 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 LUZP4Q9P127 313 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 ASB4Q9Y574 426 aa10.39□□□□□ -0.75
LIG1-211ENST00000596457 DOCK10Q96BY6 2186 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 A0A1W2PR48 441 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 TCRBV16S1A1N1A0A5B0 115 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 WASHC1A8K0Z3 465 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 AZIN1O14977 448 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 PROM1O43490 865 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 NPHS1O60500 1241 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 DPM1O60762 260 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 MYO1DO94832 1006 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SEMA3DO95025 777 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SCELO95171 688 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 ZWINTO95229 277 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 WISP1O95388 367 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 F10P00742 488 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SERPINA7P05543 415 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 CHRNGP07510 517 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 UROSP10746 265 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 HSD3B1P14060 373 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 HSD3B2P26439 372 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 TPP2P29144 1249 aaPredicted RBP10.38□□□□□ -0.75
LIG1-211ENST00000596457 SERPINB4P48594 390 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 ARFIP1P53367 373 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 MAPK12P53778 367 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SOX8P57073 446 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SLC26A5P58743 744 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 TNFRSF17Q02223 184 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 CHI3L2Q15782 390 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 EXT1Q16394 746 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 NADK2Q4G0N4 442 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 TNFAIP8L3Q5GJ75 292 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 ARL13AQ5H913 290 aaPredicted RBP10.38□□□□□ -0.75
LIG1-211ENST00000596457 HHATQ5VTY9 493 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 FCRLBQ6BAA4 426 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 MRM1Q6IN84 353 aaKnown RBP10.38□□□□□ -0.75
LIG1-211ENST00000596457 RIPOR1Q6ZS17 1223 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 COMMD6Q7Z4G1 85 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SCUBE1Q8IWY4 988 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 ZADH2Q8N4Q0 377 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 CDC26Q8NHZ8 85 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 M1APQ8TC57 530 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 DOK4Q8TEW6 326 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 APIPQ96GX9 242 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 SMAD5Q99717 465 aaKnown RBP10.38□□□□□ -0.75
LIG1-211ENST00000596457 EBPLQ9BY08 206 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 ACPTQ9BZG2 426 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 EML4Q9HC35 981 aaKnown RBP10.38□□□□□ -0.75
LIG1-211ENST00000596457 SSU72Q9NP77 194 aaKnown RBP10.38□□□□□ -0.75
LIG1-211ENST00000596457 MS4A12Q9NXJ0 267 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 PLA2G3Q9NZ20 509 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 PPT2Q9UMR5 302 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 ACTL7BQ9Y614 415 aa10.38□□□□□ -0.75
LIG1-211ENST00000596457 IGKV3D-11A0A0A0MRZ8 115 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 GNG14A0A1W2PPG7 69 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 SAGE2PA6NJ88 616 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 TMEM233B4DJY2 109 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 H3BQF6 201 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 PGRMC2O15173 223 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 TM9SF1O15321 606 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 FGF17O60258 216 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 LYPLA1O75608 230 aaPredicted RBP10.37□□□□□ -0.75
LIG1-211ENST00000596457 HSPA4LO95757 839 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 AIFM1O95831 613 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 CHEK2O96017 543 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 LINC00032P0C843 101 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 NR2F6P10588 404 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 ETV4P43268 484 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 ALDH9A1P49189 494 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 AP2B1P63010 937 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 FOLH1Q04609 750 aa10.37□□□□□ -0.75
LIG1-211ENST00000596457 ZNF33BQ06732 778 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms