RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 EBPLQ9BY08 206 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 WDR55Q9H6Y2 383 aaPredicted RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 SEMA3GQ9NS98 782 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 LYARQ9NX58 379 aaKnown RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 AHSPQ9NZD4 102 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 BAIAP2L1Q9UHR4 511 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 GPN3Q9UHW5 284 aaPredicted RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 POLR3HQ9Y535 204 aaPredicted RBP9.92□□□□□ -0.82
LIG1-210ENST00000596332 PCDHA9Q9Y5H5 950 aa9.92□□□□□ -0.82
LIG1-210ENST00000596332 NUP210LQ5VU65 1888 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 IGHV1-45A0A0A0MS14 117 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 IGHV3-20A0A0C4DH32 117 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ZNF891A8MT65 544 aaPredicted RBP9.91□□□□□ -0.82
LIG1-210ENST00000596332 TCP11X1B4DZS4 312 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 RGS14O43566 566 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 PCDH7O60245 1069 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 PRMT3O60678 531 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CRCPO75575 148 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CYC1P08574 325 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 IL3P08700 152 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CD63P08962 238 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ANXA4P09525 319 aaPredicted RBP9.91□□□□□ -0.82
LIG1-210ENST00000596332 PRKAR1AP10644 381 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 NEFHP12036 1026 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CD1EP15812 388 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CPN2P22792 545 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 EPHA3P29320 983 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 DIO3P55073 304 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 TAS2R50P59544 299 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 EMX2Q04743 252 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ACSM2AQ08AH3 577 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 MGAT2Q10469 447 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ATP1A4Q13733 1029 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CEBPEQ15744 281 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ST3GAL2Q16842 350 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 LINC00303Q3SY05 128 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 SPDYAQ5MJ70 313 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ACSM2BQ68CK6 577 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 FAAH2Q6GMR7 532 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 SLC48A1Q6P1K1 146 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 C19orf48Q6RUI8 117 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 RIMKLAQ8IXN7 391 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 DDIASQ8IXT1 998 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 LRRC8CQ8TDW0 803 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 PTPMT1Q8WUK0 201 aaPredicted RBP9.91□□□□□ -0.82
LIG1-210ENST00000596332 KIAA1143Q96AT1 154 aaPredicted RBP9.91□□□□□ -0.82
LIG1-210ENST00000596332 PPP1R36Q96LQ0 422 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 PTCHD1Q96NR3 888 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 CCT7Q99832 543 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 EBF4Q9BQW3 602 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 TRIM55Q9BYV6 548 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ZNF700Q9H0M5 742 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 RPF2Q9H7B2 306 aaKnown RBP9.91□□□□□ -0.82
LIG1-210ENST00000596332 PRDM9Q9NQV7 894 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 NMRK1Q9NWW6 199 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 P4HTMQ9NXG6 502 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ASIC5Q9NY37 505 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 C5AR2Q9P296 337 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ERVK-11Q9UQG0 969 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 MMACHCQ9Y4U1 282 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 KCNMB2Q9Y691 235 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 USH1CQ9Y6N9 552 aa9.91□□□□□ -0.82
LIG1-210ENST00000596332 ATMQ13315 3056 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 A0A088AWK7 358 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CDC14CA4D256 554 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CHEK2O96017 543 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 HEXBP07686 556 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CELA2AP08217 269 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ACPPP15309 386 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 S1PR1P21453 382 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ZNF10P21506 573 aaPredicted RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 OTX2P32243 289 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ZFP36L2P47974 494 aaKnown RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 IDH3AP50213 366 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 MAPK12P53778 367 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 RPL38P63173 70 aaKnown RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 SKP1P63208 163 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ID2Q02363 134 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 FOLH1Q04609 750 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 PDE7AQ13946 482 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 NR6A1Q15406 480 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 NSDHLQ15738 373 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 SMU1Q2TAY7 513 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 COL28A1Q2UY09 1125 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 GALNTL6Q49A17 601 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 MINDY4Q4G0A6 757 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 ZNF385BQ569K4 471 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 HSP90B2PQ58FF3 399 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 IL23RQ5VWK5 629 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 OGFOD2Q6N063 350 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 FAM180BQ6P0A1 224 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CYP20A1Q6UW02 462 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 LRRC69Q6ZNQ3 347 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 PAGE2Q7Z2X7 111 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 CPEB2Q7Z5Q1 589 aaKnown RBP9.9□□□□□ -0.82
LIG1-210ENST00000596332 LRRC34Q8IZ02 419 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 RFWD2Q8NHY2 731 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 SUN3Q8TAQ9 357 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 PSMF1Q92530 271 aa9.9□□□□□ -0.82
LIG1-210ENST00000596332 TTC9Q92623 222 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms