RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 MRPS33Q9Y291 106 aaKnown RBP16.71■□□□□ 0.27
HOMER3-208ENST00000595756 ANGPTL3Q9Y5C1 460 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 CLDN16Q9Y5I7 305 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 OTOGQ6ZRI0 2925 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 AKAP9Q99996 3911 aa16.71■□□□□ 0.27
HOMER3-208ENST00000595756 PCNX1Q96RV3 2341 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 TRBV11-1A0A0K0K1C0 115 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 ANKDD1BA6NHY2 528 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 NPIPA5E9PKD4 350 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 RGS16O15492 202 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 B3GALT2O43825 422 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 MYO1DO94832 1006 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 TBX6O95947 436 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 MYZAPP0CAP1 466 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 ADORA2A-AS1P86434 159 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 LAPTM5Q13571 262 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 RUNX2Q13950 521 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 MAPKAPK3Q16644 382 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 XKRXQ6PP77 449 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 VN1R5Q7Z5H4 357 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 SLC22A9Q8IVM8 553 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 CCDC126Q96EE4 140 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 PTCD3Q96EY7 689 aaKnown RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 VMP1Q96GC9 406 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 PKNOX2Q96KN3 472 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 ZIM3Q96PE6 472 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 SMC6Q96SB8 1091 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 EFCAB11Q9BUY7 163 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 REXO4Q9GZR2 422 aaKnown RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 IQCGQ9H095 443 aaKnown RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 STMN4Q9H169 189 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 RUBCNLQ9H714 662 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 CHST11Q9NPF2 352 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 PRTFDC1Q9NRG1 225 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 MKS1Q9NXB0 559 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 NPIPA1Q9UND3 350 aa16.7■□□□□ 0.26
HOMER3-208ENST00000595756 KLF13Q9Y2Y9 288 aaPredicted RBP16.7■□□□□ 0.26
HOMER3-208ENST00000595756 CACNA1CQ13936 2221 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 TACC2O95359 2948 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 A0A0G2JN53 185 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 A8MUA0 341 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 CLDN4O14493 209 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 ASNA1O43681 348 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 ESRRAP11474 423 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 GRNP28799 593 aaKnown RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 PTGER4P35408 488 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 NAA20P61599 178 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 PCDH1Q08174 1060 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 RCN2Q14257 317 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 TBCCQ15814 346 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 HIST2H2ACQ16777 129 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 ZNF630Q2M218 657 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 PAGE2BQ5JRK9 111 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 CEP85LQ5SZL2 805 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 HIST2H2AA3Q6FI13 130 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 CPSF7Q8N684 471 aaKnown RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 PTGR2Q8N8N7 351 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 ESAMQ96AP7 390 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 SERINC2Q96SA4 455 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 COPS7BQ9H9Q2 264 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 ADAP2Q9NPF8 381 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 ZNF223Q9UK11 482 aaPredicted RBP16.69■□□□□ 0.26
HOMER3-208ENST00000595756 GTF3C1Q12789 2109 aa16.69■□□□□ 0.26
HOMER3-208ENST00000595756 GOLGA6L10A6NI86 522 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 TGFBR3LH3BV60 316 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PRAMEF4O60810 478 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PRF1P14222 555 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 ATP5F1P24539 256 aaPredicted RBP16.68■□□□□ 0.26
HOMER3-208ENST00000595756 CERS1P27544 350 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 HTR1EP28566 365 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 CASP2P42575 452 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
HOMER3-208ENST00000595756 SMSP52788 366 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PLA2G16P53816 162 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 MTTPP55157 894 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 IRF8Q02556 426 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 TGM3Q08188 693 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 SLC13A2Q13183 592 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 E2F2Q14209 437 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 XKR6Q5GH73 641 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PRAMEF9Q5VWM5 478 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 ABHD17CQ6PCB6 329 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 SRRM1Q8IYB3 904 aaKnown RBP16.68■□□□□ 0.26
HOMER3-208ENST00000595756 C4orf33Q8N1A6 199 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 CYP4Z2PQ8N1L4 340 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 TMEM151AQ8N4L1 468 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 FAM47BQ8NA70 645 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 TMEM52Q8NDY8 209 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 UBE2E3Q969T4 207 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PHF21BQ96EK2 531 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PGM2Q96G03 612 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 APOPT1Q96IL0 206 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 PNO1Q9NRX1 252 aaKnown RBP16.68■□□□□ 0.26
HOMER3-208ENST00000595756 DAPP1Q9UN19 280 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 MEMO1Q9Y316 297 aa16.68■□□□□ 0.26
HOMER3-208ENST00000595756 UGDHO60701 494 aa16.67■□□□□ 0.26
HOMER3-208ENST00000595756 ITGA10O75578 1167 aa16.67■□□□□ 0.26
HOMER3-208ENST00000595756 SBK3P0C264 359 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms